RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 ECE1P42892 770 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 FSTL1Q12841 308 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 SNAPC2Q13487 334 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 ZYXQ15942 572 aaKnown RBP11.31□□□□□ -0.6
SF3B3-207ENST00000566095 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 KCTD1Q719H9 257 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
SF3B3-207ENST00000566095 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
SF3B3-207ENST00000566095 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 SLF1Q9BQI6 1058 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 TANGO6Q9C0B7 1094 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 AFG3L2Q9Y4W6 797 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 A0A1W2PRG0 241 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 ZBED4O75132 1171 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 TOMM70O94826 608 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 SLURP2P0DP57 97 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
SF3B3-207ENST00000566095 CETPP11597 493 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 GTF2A2P52657 109 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 NLRP5P59047 1200 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 KRT85P78386 507 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 FAM83BQ5T0W9 1011 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 MCTP1Q6DN14 999 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 HEATR3Q7Z4Q2 680 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 ADGRF4Q8IZF3 695 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 HOXC10Q9NYD6 342 aa11.3□□□□□ -0.6
SF3B3-207ENST00000566095 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 TRAK2O60296 914 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 FLOT1O75955 427 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
SF3B3-207ENST00000566095 VCAM1P19320 739 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
SF3B3-207ENST00000566095 OSBPP22059 807 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 YY1P25490 414 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 KRT2P35908 639 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 HMGCS2P54868 508 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 NAPAP54920 295 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-207ENST00000566095 JAG1P78504 1218 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 FUT2Q10981 343 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 PKP1Q13835 747 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 FBXO11Q86XK2 927 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 HOMER1Q86YM7 354 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 MB21D1Q8N884 522 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-207ENST00000566095 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 MAF1Q9H063 256 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 FOXP1Q9H334 677 aaPredicted RBP11.29□□□□□ -0.6
SF3B3-207ENST00000566095 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 LMBRD1Q9NUN5 540 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 NOL7Q9UMY1 257 aaKnown RBP11.29□□□□□ -0.6
SF3B3-207ENST00000566095 KCNH4Q9UQ05 1017 aa11.29□□□□□ -0.6
SF3B3-207ENST00000566095 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 TRAF5O00463 557 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 MMP1P03956 469 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 COPB2P35606 906 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 MRPL12P52815 198 aaKnown RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 OAZ1P54368 228 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 UBE2HP62256 183 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 SHROOM1Q2M3G4 852 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 KRT40Q6A162 431 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 CUL5Q93034 780 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 KIFC2Q96AC6 838 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 OPTNQ96CV9 577 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
SF3B3-207ENST00000566095 EHMT1Q9H9B1 1298 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 SLC45A1Q9Y2W3 748 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 MYH6P13533 1939 aa11.28□□□□□ -0.6
SF3B3-207ENST00000566095 UTRNP46939 3433 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms