RNA–Protein interactions for RNA: ENST00000565982.1

TM6SF1-208, Transcript of transmembrane 6 superfamily member 1, human

TSL 3

Gene TM6SF1, Length 856 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM6SF1-208	ENST00000565982	APLP1	P51693	650 aa		31.46	■■■□□ 2.63
TM6SF1-208	ENST00000565982	USP17L24	Q0WX57	530 aa		31.46	■■■□□ 2.63
TM6SF1-208	ENST00000565982	SYDE2	Q5VT97	1194 aa		31.46	■■■□□ 2.63
TM6SF1-208	ENST00000565982	RASGRP2	Q7LDG7	609 aa		31.46	■■■□□ 2.63
TM6SF1-208	ENST00000565982	TANGO6	Q9C0B7	1094 aa		31.46	■■■□□ 2.63
TM6SF1-208	ENST00000565982	CNTNAP5	Q8WYK1	1306 aa		31.46	■■■□□ 2.63
TM6SF1-208	ENST00000565982	GJB2	P29033	226 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	TTBK2	Q6IQ55	1244 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	GADL1	Q6ZQY3	521 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	CMTR1	Q8N1G2	835 aa	Known RBP	31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	PRPF38A	Q8NAV1	312 aa	Known RBP	31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	PHKB	Q93100	1093 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	UBA5	Q9GZZ9	404 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	CREBZF	Q9NS37	354 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	FOXD4L1	Q9NU39	408 aa		31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	SEC63	Q9UGP8	760 aa	Known RBP	31.45	■■■□□ 2.63
TM6SF1-208	ENST00000565982	JAK2	O60674	1132 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	TRAF1	Q13077	416 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	RASAL3	Q86YV0	1011 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	ADGRF4	Q8IZF3	695 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	SPRYD3	Q8NCJ5	442 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	SLF1	Q9BQI6	1058 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	AGTPBP1	Q9UPW5	1226 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982		V9GY48	417 aa	Predicted RBP	31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	MYPN	Q86TC9	1320 aa		31.44	■■■□□ 2.62
TM6SF1-208	ENST00000565982	HOXA7	P31268	230 aa	Predicted RBP	31.43	■■■□□ 2.62
TM6SF1-208	ENST00000565982	RGS22	Q8NE09	1264 aa		31.43	■■■□□ 2.62
TM6SF1-208	ENST00000565982	DDX11	Q96FC9	970 aa		31.43	■■■□□ 2.62
TM6SF1-208	ENST00000565982	CYTH3	O43739	400 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	SLC10A3	P09131	477 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	SLC16A2	P36021	539 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	CATSPERG	Q6ZRH7	1159 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	FAM177A1	Q8N128	213 aa	Predicted RBP	31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	JMJD4	Q9H9V9	463 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	HOXC10	Q9NYD6	342 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	PNMA2	Q9UL42	364 aa		31.42	■■■□□ 2.62
TM6SF1-208	ENST00000565982	MANSC4	A6NHS7	340 aa	Predicted RBP	31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	hCG_1984214	I3L0E3	225 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	FLOT1	O75955	427 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	XBP1	P17861	261 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	INHBE	P58166	350 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	COG2	Q14746	738 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	ZNF713	Q8N859	430 aa	Predicted RBP	31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	MTMR8	Q96EF0	704 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	MS4A4A	Q96JQ5	239 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	VAT1L	Q9HCJ6	419 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	PRR12	Q9ULL5	1215 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	SLC45A1	Q9Y2W3	748 aa		31.41	■■■□□ 2.62
TM6SF1-208	ENST00000565982	PNMA6F	A0A0J9YX94	578 aa		31.4	■■■□□ 2.62
TM6SF1-208	ENST00000565982	KIFC2	Q96AC6	838 aa		31.4	■■■□□ 2.62
TM6SF1-208	ENST00000565982	PPP1R9A	Q9ULJ8	1098 aa		31.4	■■■□□ 2.62
TM6SF1-208	ENST00000565982	CCL15-CCL14	A0A0B4J2E2	113 aa		31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	ZBTB5	O15062	677 aa		31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	FDPS	P14324	419 aa	Known RBP	31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	OSBP	P22059	807 aa		31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	DGKZ	Q13574	1117 aa		31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	CCL15	Q16663	113 aa		31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	PFKFB3	Q16875	520 aa	Predicted RBP	31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	PNMA3	Q9UL41	463 aa		31.39	■■■□□ 2.62
TM6SF1-208	ENST00000565982	SCG2	P13521	617 aa		31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	MOGS	Q13724	837 aa		31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	SLC35G1	Q2M3R5	365 aa		31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	PIGS	Q96S52	555 aa		31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	ALG1	Q9BT22	464 aa		31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	CPVL	Q9H3G5	476 aa		31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	CTDP1	Q9Y5B0	961 aa	Predicted RBP	31.38	■■■□□ 2.61
TM6SF1-208	ENST00000565982	TESPA1	A2RU30	521 aa	Predicted RBP	31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	IRX3	P78415	501 aa	Predicted RBP	31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	TRIM29	Q14134	588 aa		31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	ANKRD23	Q86SG2	305 aa		31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	HOMER1	Q86YM7	354 aa		31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	SH3GLB2	Q9NR46	395 aa		31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	LOC285556	D6RIA3	1793 aa		31.37	■■■□□ 2.61
TM6SF1-208	ENST00000565982	RASSF10	A6NK89	507 aa		31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	ZBED4	O75132	1171 aa		31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	DSG3	P32926	999 aa		31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	CDC37	Q16543	378 aa	Predicted RBP	31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	TREML2	Q5T2D2	321 aa		31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	LARP1B	Q659C4	914 aa	Known RBP	31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	CCDC12	Q8WUD4	166 aa	Predicted RBP	31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	RANBP17	Q9H2T7	1088 aa	Known RBP	31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	ZCCHC17	Q9NP64	241 aa	Known RBP	31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	FBXO28	Q9NVF7	368 aa		31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	CIZ1	Q9ULV3	898 aa	Predicted RBP	31.36	■■■□□ 2.61
TM6SF1-208	ENST00000565982	PPFIA3	O75145	1194 aa		31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	MKRN3	Q13064	507 aa	Known RBP	31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	PKN1	Q16512	942 aa		31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	DEFB115	Q30KQ5	88 aa		31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	GPAT2	Q6NUI2	795 aa		31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	GTF3C2	Q8WUA4	911 aa	Predicted RBP	31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	C8orf76	Q96K31	380 aa		31.35	■■■□□ 2.61
TM6SF1-208	ENST00000565982	PTPRF	P10586	1907 aa		31.34	■■■□□ 2.61
TM6SF1-208	ENST00000565982	SREBF2	Q12772	1141 aa		31.34	■■■□□ 2.61
TM6SF1-208	ENST00000565982	MB21D1	Q8N884	522 aa		31.34	■■■□□ 2.61
TM6SF1-208	ENST00000565982	PIBF1	Q8WXW3	757 aa		31.34	■■■□□ 2.61
TM6SF1-208	ENST00000565982	BRI3BP	Q8WY22	251 aa		31.34	■■■□□ 2.61
TM6SF1-208	ENST00000565982	AMN	Q9BXJ7	453 aa		31.34	■■■□□ 2.61
TM6SF1-208	ENST00000565982	FAM155A	B1AL88	458 aa	Predicted RBP	31.33	■■■□□ 2.61
TM6SF1-208	ENST00000565982	QRICH1	Q2TAL8	776 aa		31.33	■■■□□ 2.61
TM6SF1-208	ENST00000565982	OTUD7B	Q6GQQ9	843 aa		31.33	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms