RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 EXOSC10Q01780 885 aaKnown RBP14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 PLS1Q14651 629 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 BLOC1S2Q6QNY1 142 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 KCTD1Q719H9 257 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 PLEKHH3Q7Z736 793 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 NBPF11Q86T75 865 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 SOCS4Q8WXH5 440 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 TEX13BQ9BXU2 312 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 TM6SF1Q9BZW5 370 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 FBXO28Q9NVF7 368 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 SNX14Q9Y5W7 946 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 IVNS1ABPQ9Y6Y0 642 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 KIF5BP33176 963 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 GNAQP50148 359 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 ANTXR2P58335 489 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 FGD1P98174 961 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 TRAF1Q13077 416 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 IRF5Q13568 498 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 TMEM132BQ14DG7 1078 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 TKFCQ3LXA3 575 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 POTEEQ6S8J3 1075 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 NFXL1Q6ZNB6 911 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 CHST3Q7LGC8 479 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 SGMS1Q86VZ5 419 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 RIOX2Q8IUF8 465 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 TRMT44Q8IYL2 757 aaKnown RBP14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 ABRAQ8N0Z2 381 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 FBXL16Q8N461 479 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 NUDT12Q9BQG2 462 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 SLC5A4Q9NY91 659 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 FBXO40Q9UH90 709 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 MTMR7Q9Y216 660 aa14.7□□□□□ -0.06
SHCBP1-204ENST00000565887 SLC15A5A6NIM6 579 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 DDAH1O94760 285 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 XRCC5P13010 732 aaKnown RBP14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 SMARCA1P28370 1054 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 PPP2R5BQ15173 497 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 ADCK5Q3MIX3 580 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 SYDE2Q5VT97 1194 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 TNS4Q8IZW8 715 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 RAET1EQ8TD07 263 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 JAKMIP1Q96N16 626 aaKnown RBP14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 LZTS2Q9BRK4 669 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 MOV10L1Q9BXT6 1211 aaKnown RBP14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 ARHGAP39Q9C0H5 1083 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 MCOLN1Q9GZU1 580 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 MAF1Q9H063 256 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 LY9Q9HBG7 655 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 GPCPD1Q9NPB8 672 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 ZNF214Q9UL59 606 aaPredicted RBP14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 PRR12Q9ULL5 1215 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 SLC12A7Q9Y666 1083 aa14.69□□□□□ -0.06
SHCBP1-204ENST00000565887 RLFQ13129 1914 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 SH2B2O14492 632 aaPredicted RBP14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 TROAPQ12815 778 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 GPR142Q7Z601 462 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 NCAPG2Q86XI2 1143 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 CHST13Q8NET6 341 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 IL27Q8NEV9 243 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 REPS2Q8NFH8 660 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 CTCFLQ8NI51 663 aaPredicted RBP14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 PXYLP1Q8TE99 480 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 GJD2Q9UKL4 321 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 CYP46A1Q9Y6A2 500 aa14.68□□□□□ -0.06
SHCBP1-204ENST00000565887 PALM3A6NDB9 673 aaPredicted RBP14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 KLRF2D3W0D1 207 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 FCER1AP12319 257 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 ERCC3P19447 782 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 CASTP20810 708 aaKnown RBP14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 PTPREP23469 700 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 CTGFP29279 349 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 RGS2P41220 211 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 FLT3LGP49771 235 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 RCAN1P53805 252 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 GRM4Q14833 912 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 WDR78Q5VTH9 848 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 RUFY3Q7L099 469 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 ZNF654Q8IZM8 581 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 CPXCR1Q8N123 301 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 PORCNQ9H237 461 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 RANBP17Q9H2T7 1088 aaKnown RBP14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 UPF2Q9HAU5 1272 aaKnown RBP14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 ZSWIM6Q9HCJ5 1215 aa14.67□□□□□ -0.06
SHCBP1-204ENST00000565887 FRMPD2Q68DX3 1309 aaPredicted RBP14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 ICAM1P05362 532 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 RPS6KB1P23443 525 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 SLC16A2P36021 539 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 KCTD2Q14681 263 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 MORN1Q5T089 497 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 SLAIN1Q8ND83 568 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 IL17RAQ96F46 866 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 MAD2L2Q9UI95 211 aa14.66□□□□□ -0.06
SHCBP1-204ENST00000565887 MGAMO43451 1857 aa14.65□□□□□ -0.06
SHCBP1-204ENST00000565887 PARP14Q460N5 1801 aa14.65□□□□□ -0.06
SHCBP1-204ENST00000565887 CCDC196A0A1B0GTZ2 297 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms