RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 KCTD1Q719H9 257 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 PROCA1Q8NCQ7 364 aaPredicted RBP17.78■□□□□ 0.44
KNOP1-203ENST00000565844 MAP3K14Q99558 947 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
KNOP1-203ENST00000565844 SH2B1Q9NRF2 756 aaPredicted RBP17.78■□□□□ 0.44
KNOP1-203ENST00000565844 RBM19Q9Y4C8 960 aaKnown RBP17.78■□□□□ 0.44
KNOP1-203ENST00000565844 K7ELQ4 463 aaPredicted RBP17.77■□□□□ 0.43
KNOP1-203ENST00000565844 PFKFB2O60825 505 aa17.77■□□□□ 0.43
KNOP1-203ENST00000565844 GPATCH4Q5T3I0 446 aaKnown RBP17.77■□□□□ 0.43
KNOP1-203ENST00000565844 FASTKD5Q7L8L6 764 aaKnown RBP17.77■□□□□ 0.43
KNOP1-203ENST00000565844 NECAB1Q8N987 351 aa17.77■□□□□ 0.43
KNOP1-203ENST00000565844 TMX3Q96JJ7 454 aa17.77■□□□□ 0.43
KNOP1-203ENST00000565844 TANGO6Q9C0B7 1094 aa17.77■□□□□ 0.43
KNOP1-203ENST00000565844 RPAP3Q9H6T3 665 aaPredicted RBP17.77■□□□□ 0.43
KNOP1-203ENST00000565844 NCOA5Q9HCD5 579 aaKnown RBP17.77■□□□□ 0.43
KNOP1-203ENST00000565844 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.43
KNOP1-203ENST00000565844 MAD2L2Q9UI95 211 aa17.77■□□□□ 0.43
KNOP1-203ENST00000565844 CCDC196A0A1B0GTZ2 297 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 PALM3A6NDB9 673 aaPredicted RBP17.76■□□□□ 0.43
KNOP1-203ENST00000565844 BTBD19C9JJ37 291 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 SP3Q02447 781 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 SCRN1Q12765 414 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 IKQ13123 557 aaPredicted RBP17.76■□□□□ 0.43
KNOP1-203ENST00000565844 STAG2Q8N3U4 1231 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 GTF3C6Q969F1 213 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 ERO1AQ96HE7 468 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 MYH6P13533 1939 aa17.76■□□□□ 0.43
KNOP1-203ENST00000565844 TMEM232C9JQI7 657 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 KLRF2D3W0D1 207 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 CDC27P30260 824 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 MOGSQ13724 837 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 PPP2R5BQ15173 497 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 TREML2Q5T2D2 321 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 CCDC83Q8IWF9 413 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 ZFYVE28Q9HCC9 887 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 FAM217BQ9NTX9 383 aaPredicted RBP17.75■□□□□ 0.43
KNOP1-203ENST00000565844 AGTPBP1Q9UPW5 1226 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
KNOP1-203ENST00000565844 RLFQ13129 1914 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 CPLX1O14810 134 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 DHX16O60231 1041 aaKnown RBP17.74■□□□□ 0.43
KNOP1-203ENST00000565844 PLEKHA8P1O95397 391 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 ADD1P35611 737 aaKnown RBP17.74■□□□□ 0.43
KNOP1-203ENST00000565844 SLC16A2P36021 539 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 GNAQP50148 359 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 STAT2P52630 851 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 TTBK2Q6IQ55 1244 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
KNOP1-203ENST00000565844 EFCC1Q9HA90 598 aa17.74■□□□□ 0.43
KNOP1-203ENST00000565844 MGAMO43451 1857 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 FLOT1O75955 427 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 ST3GAL1Q11201 340 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 BECN1Q14457 450 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
KNOP1-203ENST00000565844 LZTS2Q9BRK4 669 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 CPVLQ9H3G5 476 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 FEM1BQ9UK73 627 aa17.73■□□□□ 0.43
KNOP1-203ENST00000565844 COL11A1P12107 1806 aaPredicted RBP17.72■□□□□ 0.43
KNOP1-203ENST00000565844 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.43
KNOP1-203ENST00000565844 GPAT2Q6NUI2 795 aa17.72■□□□□ 0.43
KNOP1-203ENST00000565844 CPLX2Q6PUV4 134 aaKnown RBP17.72■□□□□ 0.43
KNOP1-203ENST00000565844 FAM160B2Q86V87 743 aa17.72■□□□□ 0.43
KNOP1-203ENST00000565844 CCDC82Q8N4S0 544 aa17.72■□□□□ 0.43
KNOP1-203ENST00000565844 CHURC1Q8WUH1 139 aa17.72■□□□□ 0.43
KNOP1-203ENST00000565844 ARHGAP39Q9C0H5 1083 aa17.72■□□□□ 0.43
KNOP1-203ENST00000565844 FBXO28Q9NVF7 368 aa17.72■□□□□ 0.43
KNOP1-203ENST00000565844 KIAA0100Q14667 2235 aaKnown RBP17.72■□□□□ 0.43
KNOP1-203ENST00000565844 CDKL5O76039 1030 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 CATSPERGQ6ZRH7 1159 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 NBPF11Q86T75 865 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
KNOP1-203ENST00000565844 KIFC2Q96AC6 838 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 SLF1Q9BQI6 1058 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 A0A0G2JMZ2 1700 aa17.71■□□□□ 0.43
KNOP1-203ENST00000565844 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
KNOP1-203ENST00000565844 CNTNAP5Q8WYK1 1306 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 PLA2G6O60733 806 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 MYCP01106 439 aaPredicted RBP17.7■□□□□ 0.42
KNOP1-203ENST00000565844 IFNAR1P17181 557 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
KNOP1-203ENST00000565844 IRX3P78415 501 aaPredicted RBP17.7■□□□□ 0.42
KNOP1-203ENST00000565844 NTRK3Q16288 839 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 SYDE2Q5VT97 1194 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 BTNL9Q6UXG8 535 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 ANKRD23Q86SG2 305 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 ADGRF4Q8IZF3 695 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 SPZ1Q9BXG8 430 aa17.7■□□□□ 0.42
KNOP1-203ENST00000565844 CPA4Q9UI42 421 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms