RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 ZNF543Q08ER8 600 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 SHROOM1Q2M3G4 852 aaPredicted RBP10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 UTP14CQ5TAP6 766 aaKnown RBP10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 USP17L2Q6R6M4 530 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 FAM177A1Q8N128 213 aaPredicted RBP10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 ARID3AQ99856 593 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 KCNF1Q9H3M0 494 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 TAF1DQ9H5J8 278 aaPredicted RBP10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 DDX19AQ9NUU7 478 aaKnown RBP10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 ZNF112Q9UJU3 913 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 FOSBP53539 338 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 SAFBQ15424 915 aaKnown RBP eCLIP10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 PKN1Q16512 942 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 PFKFB3Q16875 520 aaPredicted RBP10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 CCDC96Q2M329 555 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 SLFN13Q68D06 897 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 KRT40Q6A162 431 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 SCAND2PQ9GZW5 306 aaPredicted RBP10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 SH3GLB2Q9NR46 395 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 PYCARDQ9ULZ3 195 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 TMX2Q9Y320 296 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 DOCK1Q14185 1865 aa10.79□□□□□ -0.68
CNEP1R1-206ENST00000565556 F5H6K3 240 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 AP5Z1O43299 807 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 GOLGA8HP0CJ92 632 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 SCG2P13521 617 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 NF2P35240 595 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 SLC1A4P43007 532 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 KLRC3Q07444 240 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 RESTQ13127 1097 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 ATL3Q6DD88 541 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 BRAPQ7Z569 592 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 AIFM3Q96NN9 605 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 RIOX1Q9H6W3 641 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 MRVI1Q9Y6F6 885 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 GOLGA6L4A6NEF3 574 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 GUCY1B3Q02153 619 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 DMTNQ08495 405 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 PRAMEF18Q5VWM3 479 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 SCYL3Q8IZE3 742 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 SPC24Q8NBT2 197 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 TNMDQ9H2S6 317 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 GPCPD1Q9NPB8 672 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 PICK1Q9NRD5 415 aa10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 SEC63Q9UGP8 760 aaKnown RBP10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 BAZ2BQ9UIF8 2168 aaKnown RBP10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
CNEP1R1-206ENST00000565556 MYH15Q9Y2K3 1946 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 A0A1W2PRG0 241 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 POTECB2RU33 542 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 hCG_1984214I3L0E3 225 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 RIOK3O14730 519 aaKnown RBP10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 CYTH3O43739 400 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 RAD21O60216 631 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 PPP1R12BO60237 982 aaPredicted RBP10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 NDUFB10O96000 172 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 MMP1P03956 469 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 EAPPQ56P03 285 aaPredicted RBP10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 OTUD7BQ6GQQ9 843 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 RBM43Q6ZSC3 357 aaKnown RBP10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 PDCL2Q8N4E4 241 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZNF713Q8N859 430 aaPredicted RBP10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 ANKRD7Q92527 254 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 KLRG1Q96E93 195 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 BRMS1Q9HCU9 246 aa10.77□□□□□ -0.69
CNEP1R1-206ENST00000565556 ADM5C9JUS6 153 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 UBE2Q2LH0YL09 131 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 CTIFO43310 598 aaKnown RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 CAVIN2O95810 425 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 BMP3P12645 472 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 VEGFAP15692 232 aaPredicted RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 LIG1P18858 919 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 PTGS1P23219 599 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 U2AF2P26368 475 aaKnown RBP eCLIP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 CALML3P27482 149 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 INPP5BP32019 993 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 KIF23Q02241 960 aaPredicted RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 SYCP1Q15431 976 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 NOL9Q5SY16 702 aaKnown RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 ACER1Q8TDN7 264 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 CCDC12Q8WUD4 166 aaPredicted RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 TSC1Q92574 1164 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 WDR18Q9BV38 432 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 UBA5Q9GZZ9 404 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 FOXP1Q9H334 677 aaPredicted RBP10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 VCPKMTQ9H867 229 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms