RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 KIFC2Q96AC6 838 aa28.26■■■□□ 2.11
RAB40C-209ENST00000565511 LENG1Q96BZ8 264 aaPredicted RBP28.26■■■□□ 2.11
RAB40C-209ENST00000565511 A0A0D9SFI3 127 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 TSPY3P0CV98 308 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 TSPY8P0CW00 308 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 CPXCR1Q8N123 301 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 FAM227BQ96M60 508 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 TINF2Q9BSI4 451 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 ZNF287Q9HBT7 754 aa28.25■■■□□ 2.11
RAB40C-209ENST00000565511 RAVER2Q9HCJ3 691 aaKnown RBP28.25■■■□□ 2.11
RAB40C-209ENST00000565511 NMT2O60551 498 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 PDE4BQ07343 736 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 LRRC41Q15345 812 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 SLFN13Q68D06 897 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 PRPF38AQ8NAV1 312 aaKnown RBP28.24■■■□□ 2.11
RAB40C-209ENST00000565511 EVI5LQ96CN4 794 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 LNPKQ9C0E8 428 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 SLC38A10Q9HBR0 1119 aa28.24■■■□□ 2.11
RAB40C-209ENST00000565511 MYCNP04198 464 aaPredicted RBP28.23■■■□□ 2.11
RAB40C-209ENST00000565511 SLC4A3P48751 1232 aa28.23■■■□□ 2.11
RAB40C-209ENST00000565511 RTP1P59025 263 aa28.23■■■□□ 2.11
RAB40C-209ENST00000565511 MDM2Q00987 491 aaPredicted RBP28.23■■■□□ 2.11
RAB40C-209ENST00000565511 FGD4Q96M96 766 aa28.23■■■□□ 2.11
RAB40C-209ENST00000565511 IL17RBQ9NRM6 502 aa28.23■■■□□ 2.11
RAB40C-209ENST00000565511 DIS3Q9Y2L1 958 aaKnown RBP28.23■■■□□ 2.11
RAB40C-209ENST00000565511 DNAJC25-GNG10A0A024R161 153 aa28.22■■■□□ 2.11
RAB40C-209ENST00000565511 ATP2A1O14983 1001 aa28.22■■■□□ 2.11
RAB40C-209ENST00000565511 ZNF865P0CJ78 1059 aaPredicted RBP28.22■■■□□ 2.11
RAB40C-209ENST00000565511 COPB2P35606 906 aa28.22■■■□□ 2.11
RAB40C-209ENST00000565511 FEM1BQ9UK73 627 aa28.22■■■□□ 2.11
RAB40C-209ENST00000565511 SYNPO2Q9UMS6 1093 aa28.22■■■□□ 2.11
RAB40C-209ENST00000565511 BMP3P12645 472 aa28.21■■■□□ 2.11
RAB40C-209ENST00000565511 ZNF589Q86UQ0 364 aaPredicted RBP28.21■■■□□ 2.11
RAB40C-209ENST00000565511 ARRDC4Q8NCT1 418 aa28.21■■■□□ 2.11
RAB40C-209ENST00000565511 KBTBD13C9JR72 458 aa28.2■■■□□ 2.1
RAB40C-209ENST00000565511 ZBED4O75132 1171 aa28.2■■■□□ 2.1
RAB40C-209ENST00000565511 FERMT2Q96AC1 680 aa28.2■■■□□ 2.1
RAB40C-209ENST00000565511 UBE2OQ9C0C9 1292 aaKnown RBP28.2■■■□□ 2.1
RAB40C-209ENST00000565511 ZBTB47Q9UFB7 747 aaPredicted RBP28.2■■■□□ 2.1
RAB40C-209ENST00000565511 TMEM232C9JQI7 657 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 SNAI1O95863 264 aaPredicted RBP28.19■■■□□ 2.1
RAB40C-209ENST00000565511 PGK1P00558 417 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 SLC3A2P08195 630 aaKnown RBP28.19■■■□□ 2.1
RAB40C-209ENST00000565511 ADCYAP1R1P41586 468 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 NMIQ13287 307 aaPredicted RBP28.19■■■□□ 2.1
RAB40C-209ENST00000565511 SLC39A5Q6ZMH5 540 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 SMC5Q8IY18 1101 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 HELLSQ9NRZ9 838 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 NRBP1Q9UHY1 535 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 ANAPC4Q9UJX5 808 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 ATP11BQ9Y2G3 1177 aa28.19■■■□□ 2.1
RAB40C-209ENST00000565511 LCTP09848 1927 aa28.18■■■□□ 2.1
RAB40C-209ENST00000565511 IGHDP01880 384 aa28.18■■■□□ 2.1
RAB40C-209ENST00000565511 TRIM60Q495X7 471 aa28.18■■■□□ 2.1
RAB40C-209ENST00000565511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.18■■■□□ 2.17e-7■■■□□ 16.7
RAB40C-209ENST00000565511 TDHQ8IZJ6 230 aa28.18■■■□□ 2.1
RAB40C-209ENST00000565511 XPNPEP3Q9NQH7 507 aa28.18■■■□□ 2.1
RAB40C-209ENST00000565511 ZNF536O15090 1300 aa28.18■■■□□ 2.1
RAB40C-209ENST00000565511 MCCP23508 829 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 SNAP25P60880 206 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 SNX17Q15036 470 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 ALX1Q15699 326 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 B4GALNT3Q6L9W6 998 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 EXOC6Q8TAG9 804 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 GMCL1Q96IK5 515 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 LRRC37A2A6NM11 1700 aa28.17■■■□□ 2.1
RAB40C-209ENST00000565511 TSPY2A6NKD2 308 aa28.16■■■□□ 2.1
RAB40C-209ENST00000565511 KCTD1Q719H9 257 aa28.16■■■□□ 2.1
RAB40C-209ENST00000565511 DDX11Q96FC9 970 aa28.16■■■□□ 2.1
RAB40C-209ENST00000565511 HOMER2Q9NSB8 354 aa28.16■■■□□ 2.1
RAB40C-209ENST00000565511 ISY1Q9ULR0 285 aaKnown RBP28.16■■■□□ 2.1
RAB40C-209ENST00000565511 STX8Q9UNK0 236 aa28.16■■■□□ 2.1
RAB40C-209ENST00000565511 PHF24Q9UPV7 400 aa28.16■■■□□ 2.1
RAB40C-209ENST00000565511 ADCY6O43306 1168 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 ORC4O43929 436 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 RANBP6O60518 1105 aaKnown RBP28.15■■■□□ 2.1
RAB40C-209ENST00000565511 FGAP02671 866 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 FGRP09769 529 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 RARBP10826 455 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 NOVP48745 357 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 IRX5P78411 483 aaPredicted RBP28.15■■■□□ 2.1
RAB40C-209ENST00000565511 AGBL1Q96MI9 1066 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 SYNGAP1Q96PV0 1343 aa28.15■■■□□ 2.1
RAB40C-209ENST00000565511 ADAMTS4O75173 837 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 SLC1A4P43007 532 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 STAT2P52630 851 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 LRIT3Q3SXY7 679 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 MCMDC2Q4G0Z9 681 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 MAMDC4Q6UXC1 1216 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 MTMR7Q9Y216 660 aa28.14■■■□□ 2.1
RAB40C-209ENST00000565511 CTDP1Q9Y5B0 961 aaPredicted RBP28.14■■■□□ 2.1
RAB40C-209ENST00000565511 HSPD1P10809 573 aaKnown RBP28.13■■■□□ 2.09
RAB40C-209ENST00000565511 AKR1A1P14550 325 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 OAZ1P54368 228 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 SH3RF1Q7Z6J0 888 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 PLEKHM2Q8IWE5 1019 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 STAG1Q8WVM7 1258 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 PDLIM7Q9NR12 457 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 CNPY2Q9Y2B0 182 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 SYNRGQ9UMZ2 1314 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms