RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CYP46A1Q9Y6A2 500 aa30.38■■■□□ 2.45
NME3-208ENST00000565379 RPS6KB1P23443 525 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 GJA8P48165 433 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 WTAPQ15007 396 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 SEC23AQ15436 765 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 TMEM67Q5HYA8 995 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 RUFY3Q7L099 469 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 IGDCC4Q8TDY8 1250 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 PXYLP1Q8TE99 480 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 TMEM47Q9BQJ4 181 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 KAT14Q9H8E8 782 aa30.37■■■□□ 2.45
NME3-208ENST00000565379 LIFRP42702 1097 aa30.36■■■□□ 2.45
NME3-208ENST00000565379 FBXL16Q8N461 479 aa30.36■■■□□ 2.45
NME3-208ENST00000565379 CHST3Q7LGC8 479 aa30.35■■■□□ 2.45
NME3-208ENST00000565379 TBC1D32Q96NH3 1257 aa30.35■■■□□ 2.45
NME3-208ENST00000565379 SPDYE16A6NNV3 312 aaPredicted RBP30.34■■■□□ 2.45
NME3-208ENST00000565379 H0YGN5 161 aa30.34■■■□□ 2.45
NME3-208ENST00000565379 SH2B2O14492 632 aaPredicted RBP30.34■■■□□ 2.45
NME3-208ENST00000565379 CYP2B6P20813 491 aa30.34■■■□□ 2.45
NME3-208ENST00000565379 BTBD7Q9P203 1132 aa30.34■■■□□ 2.45
NME3-208ENST00000565379 COLQQ9Y215 455 aaPredicted RBP30.34■■■□□ 2.45
NME3-208ENST00000565379 F5H6K3 240 aa30.33■■■□□ 2.45
NME3-208ENST00000565379 FGD1P98174 961 aa30.33■■■□□ 2.45
NME3-208ENST00000565379 KLRC3Q07444 240 aa30.33■■■□□ 2.45
NME3-208ENST00000565379 LRRC47Q8N1G4 583 aaKnown RBP30.33■■■□□ 2.45
NME3-208ENST00000565379 U2AF1L4Q8WU68 220 aaKnown RBP30.33■■■□□ 2.45
NME3-208ENST00000565379 WDR46O15213 610 aaKnown RBP30.32■■■□□ 2.44
NME3-208ENST00000565379 SPICE1Q8N0Z3 855 aa30.32■■■□□ 2.44
NME3-208ENST00000565379 PNMA1Q8ND90 353 aa30.32■■■□□ 2.44
NME3-208ENST00000565379 TRIB2Q92519 343 aa30.32■■■□□ 2.44
NME3-208ENST00000565379 LY9Q9HBG7 655 aa30.32■■■□□ 2.44
NME3-208ENST00000565379 SLFN13Q68D06 897 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 GPR142Q7Z601 462 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 DPF3Q92784 378 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 GMCL1Q96IK5 515 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 DEFB118Q96PH6 123 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 RABGAP1Q9Y3P9 1069 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 RLFQ13129 1914 aa30.31■■■□□ 2.44
NME3-208ENST00000565379 NDUFB10O96000 172 aa30.3■■■□□ 2.44
NME3-208ENST00000565379 UBE2Q1Q7Z7E8 422 aa30.3■■■□□ 2.44
NME3-208ENST00000565379 SGMS1Q86VZ5 419 aa30.3■■■□□ 2.44
NME3-208ENST00000565379 GTF3C2Q8WUA4 911 aaPredicted RBP30.3■■■□□ 2.44
NME3-208ENST00000565379 DCAF4Q8WV16 495 aa30.3■■■□□ 2.44
NME3-208ENST00000565379 MYH4Q9Y623 1939 aa30.3■■■□□ 2.44
NME3-208ENST00000565379 CCDC69A6NI79 296 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 MAPK4P31152 587 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 FXR1P51114 621 aaKnown RBP eCLIP30.29■■■□□ 2.44
NME3-208ENST00000565379 NFXL1Q6ZNB6 911 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 CATIPQ7Z7H3 387 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 USP6NLQ92738 828 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 TANGO6Q9C0B7 1094 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 ALDH8A1Q9H2A2 487 aaPredicted RBP30.29■■■□□ 2.44
NME3-208ENST00000565379 PAK6Q9NQU5 681 aaPredicted RBP30.29■■■□□ 2.44
NME3-208ENST00000565379 PDRG1Q9NUG6 133 aa30.29■■■□□ 2.44
NME3-208ENST00000565379 RAD21O60216 631 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 HMGCRP04035 888 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 CAPN2P17655 700 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 SLC1A4P43007 532 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 COL9A3Q14050 684 aaPredicted RBP30.28■■■□□ 2.44
NME3-208ENST00000565379 CCL14Q16627 93 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 MORN1Q5T089 497 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 Q6ZUG5 572 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 PLEKHH3Q7Z736 793 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 HTATIP2Q9BUP3 242 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 AGXT2Q9BYV1 514 aa30.28■■■□□ 2.44
NME3-208ENST00000565379 UPF3BQ9BZI7 483 aaKnown RBP30.28■■■□□ 2.44
NME3-208ENST00000565379 SGPL1O95470 568 aa30.27■■■□□ 2.44
NME3-208ENST00000565379 CPA1P15085 419 aa30.27■■■□□ 2.44
NME3-208ENST00000565379 LBX2Q6XYB7 198 aa30.27■■■□□ 2.44
NME3-208ENST00000565379 SYNE3Q6ZMZ3 975 aa30.27■■■□□ 2.44
NME3-208ENST00000565379 NUDT12Q9BQG2 462 aa30.27■■■□□ 2.44
NME3-208ENST00000565379 LRRC2Q9BYS8 371 aa30.27■■■□□ 2.44
NME3-208ENST00000565379 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.27■■■□□ 2.441e-12■■□□□ 11.8
NME3-208ENST00000565379 DDAH1O94760 285 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 CALM1P0DP23 149 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 CALM2P0DP24 149 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 CALM3P0DP25 149 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 BMP3P12645 472 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 RABEP1Q15276 862 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 ANKRD1Q15327 319 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 WDR78Q5VTH9 848 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 CCAR1Q8IX12 1150 aaKnown RBP30.26■■■□□ 2.43
NME3-208ENST00000565379 TCEANC2Q96MN5 208 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 MAP3K14Q99558 947 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 SLC12A7Q9Y666 1083 aa30.26■■■□□ 2.43
NME3-208ENST00000565379 SNHG28P0DPA3 235 aa30.25■■■□□ 2.43
NME3-208ENST00000565379 PDHBP11177 359 aa30.25■■■□□ 2.43
NME3-208ENST00000565379 RCAN1P53805 252 aa30.25■■■□□ 2.43
NME3-208ENST00000565379 GPATCH4Q5T3I0 446 aaKnown RBP30.25■■■□□ 2.43
NME3-208ENST00000565379 SAMD1Q6SPF0 538 aaPredicted RBP30.25■■■□□ 2.43
NME3-208ENST00000565379 SOCS4Q8WXH5 440 aa30.25■■■□□ 2.43
NME3-208ENST00000565379 KIF2CQ99661 725 aa30.25■■■□□ 2.43
NME3-208ENST00000565379 FARP2O94887 1054 aaPredicted RBP30.24■■■□□ 2.43
NME3-208ENST00000565379 ZNF654Q8IZM8 581 aa30.24■■■□□ 2.43
NME3-208ENST00000565379 A0A0G2JMZ2 1700 aa30.24■■■□□ 2.43
NME3-208ENST00000565379 PLA2G6O60733 806 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 NEK4P51957 841 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 ASPRV1Q53RT3 343 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 FAM83BQ5T0W9 1011 aa30.23■■■□□ 2.43
NME3-208ENST00000565379 BRF1Q92994 677 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms