RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 C1orf53Q5VUE5 145 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 SLFN13Q68D06 897 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 SNRNP48Q6IEG0 339 aaKnown RBP14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 ZNF467Q7Z7K2 595 aaPredicted RBP14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 CHST13Q8NET6 341 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 DDX11Q96FC9 970 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 GMCL1Q96IK5 515 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 PARP14Q460N5 1801 aa14.47□□□□□ -0.09
GTF3C1-204ENST00000564664 SYNGAP1Q96PV0 1343 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 RARBP10826 455 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 BMP3P12645 472 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 SYN1P17600 705 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 PRAMEF19Q5SWL8 479 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 SLC39A5Q6ZMH5 540 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 FAM160B2Q86V87 743 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 TDHQ8IZJ6 230 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 UBE2OQ9C0C9 1292 aaKnown RBP14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 PRKAG2Q9UGJ0 569 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
GTF3C1-204ENST00000564664 DNAJC25-GNG10A0A024R161 153 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 PGK2P07205 417 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 FGRP09769 529 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 LRRC41Q15345 812 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 TKFCQ3LXA3 575 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 MCMDC2Q4G0Z9 681 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 GJC2Q5T442 439 aaPredicted RBP14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 RNF180Q86T96 592 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 STAG1Q8WVM7 1258 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 LBHD1Q9BQE6 289 aaPredicted RBP14.45□□□□□ -0.1
GTF3C1-204ENST00000564664 COL11A1P12107 1806 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 TSPY2A6NKD2 308 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 ORC4O43929 436 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 ZNF865P0CJ78 1059 aaPredicted RBP14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 AKR1A1P14550 325 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 NOVP48745 357 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 STAT2P52630 851 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 SNX17Q15036 470 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 FAM47AQ5JRC9 791 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 CPXCR1Q8N123 301 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 TSEN34Q9BSV6 310 aaKnown RBP14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 XPNPEP3Q9NQH7 507 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 FAM184BQ9ULE4 1060 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 PHF24Q9UPV7 400 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 RIPK3Q9Y572 518 aa14.44□□□□□ -0.1
GTF3C1-204ENST00000564664 SZT2Q5T011 3432 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 PCP11498 1178 aaKnown RBP14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 SLC1A4P43007 532 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 NT5C2P49902 561 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 MFAP1P55081 439 aaKnown RBP14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 RTP1P59025 263 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 RCSD1Q6JBY9 416 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 SMC5Q8IY18 1101 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 LRRC47Q8N1G4 583 aaKnown RBP14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 ANKRD35Q8N283 1001 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 FRMPD3Q5JV73 1810 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 MYH4Q9Y623 1939 aa14.43□□□□□ -0.1
GTF3C1-204ENST00000564664 TMEM232C9JQI7 657 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 FOXP2O15409 715 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 ADCYAP1R1P41586 468 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 ANO1Q5XXA6 986 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 ABHD16BQ9H3Z7 469 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 RAVER2Q9HCJ3 691 aaKnown RBP14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 IL17RBQ9NRM6 502 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 TCP11L1Q9NUJ3 509 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 STX8Q9UNK0 236 aa14.42□□□□□ -0.1
GTF3C1-204ENST00000564664 ZMYM6O95789 1325 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 SOX1O00570 391 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 RANBP6O60518 1105 aaKnown RBP14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 DUSP11O75319 330 aaKnown RBP14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 SNAI1O95863 264 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 FGAP02671 866 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 MCCP23508 829 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 CTDSPL2Q05D32 466 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 DCAF4Q8WV16 495 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 TTC14Q96N46 770 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 PNMA2Q9UL42 364 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 ATP11BQ9Y2G3 1177 aa14.41□□□□□ -0.1
GTF3C1-204ENST00000564664 DNAH12Q6ZR08 3092 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 TRIM6-TRIM34B2RNG4 842 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 HSPD1P10809 573 aaKnown RBP14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 TAL1P17542 331 aaPredicted RBP14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 SLC4A3P48751 1232 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 IKQ13123 557 aaPredicted RBP14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 ACVR2BQ13705 512 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 VPS53Q5VIR6 699 aa14.4□□□□□ -0.1
GTF3C1-204ENST00000564664 NUP133Q8WUM0 1156 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms