RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FCER1AP12319 257 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 PRKAR2AP13861 404 aaKnown RBP21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 COPB2P35606 906 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 NOVP48745 357 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 MFSD14CQ5VZR4 134 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 ABRAQ8N0Z2 381 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 REPS2Q8NFH8 660 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 NPLOC4Q8TAT6 608 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 SHISA4Q96DD7 197 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 IL25Q9H293 177 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 ZNF214Q9UL59 606 aaPredicted RBP21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 MTMR7Q9Y216 660 aa21.64■■□□□ 1.05
SYNGR3-204ENST00000564642 SLC4A3P48751 1232 aa21.63■■□□□ 1.05
SYNGR3-204ENST00000564642 NT5C2P49902 561 aa21.63■■□□□ 1.05
SYNGR3-204ENST00000564642 STAT2P52630 851 aa21.63■■□□□ 1.05
SYNGR3-204ENST00000564642 CACNB2Q08289 660 aaPredicted RBP21.63■■□□□ 1.05
SYNGR3-204ENST00000564642 RCSD1Q6JBY9 416 aa21.63■■□□□ 1.05
SYNGR3-204ENST00000564642 FAM160B2Q86V87 743 aa21.63■■□□□ 1.05
SYNGR3-204ENST00000564642 ZNF236Q9UL36 1845 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 NEDD4P46934 1319 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 FDX1P10109 184 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 TOP1P11387 765 aaKnown RBP21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 MAP3K21Q5TCX8 1036 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 SNRNP48Q6IEG0 339 aaKnown RBP21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 CPXCR1Q8N123 301 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 TTC14Q96N46 770 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 MMP19Q99542 508 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 TEX13BQ9BXU2 312 aa21.62■■□□□ 1.05
SYNGR3-204ENST00000564642 KCTD2Q14681 263 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 KCTD1Q719H9 257 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 IQCA1Q86XH1 822 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 TMEM47Q9BQJ4 181 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 SLC38A10Q9HBR0 1119 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 RAVER2Q9HCJ3 691 aaKnown RBP21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 FLRT1Q9NZU1 646 aa21.61■■□□□ 1.05
SYNGR3-204ENST00000564642 ATP2A1O14983 1001 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 COBLO75128 1261 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 NEFLP07196 543 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 CCDC96Q2M329 555 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 CCDC178Q5BJE1 867 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 DCAF4Q8WV16 495 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 ZKSCAN3Q9BRR0 538 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 KRT23Q9C075 422 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 CRISPLD2Q9H0B8 497 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 CNNM2Q9H8M5 875 aa21.6■■□□□ 1.05
SYNGR3-204ENST00000564642 B4E1Z4 1266 aa21.59■■□□□ 1.05
SYNGR3-204ENST00000564642 PLA2G6O60733 806 aa21.59■■□□□ 1.05
SYNGR3-204ENST00000564642 KDM4AO75164 1064 aa21.59■■□□□ 1.05
SYNGR3-204ENST00000564642 FARP2O94887 1054 aaPredicted RBP21.59■■□□□ 1.05
SYNGR3-204ENST00000564642 OAZ1P54368 228 aa21.59■■□□□ 1.05
SYNGR3-204ENST00000564642 SGSM2O43147 1006 aa21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 CCND3P30281 292 aaPredicted RBP21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 PTH1RQ03431 593 aa21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 OLFML2BQ68BL8 750 aa21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 DGKHQ86XP1 1220 aa21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 ZSWIM5Q9P217 1185 aa21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 RIPK3Q9Y572 518 aa21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
SYNGR3-204ENST00000564642 DLL1O00548 723 aa21.57■■□□□ 1.04
SYNGR3-204ENST00000564642 CNGA1P29973 690 aa21.57■■□□□ 1.04
SYNGR3-204ENST00000564642 CYP2C19P33261 490 aa21.57■■□□□ 1.04
SYNGR3-204ENST00000564642 DDX11Q96FC9 970 aa21.57■■□□□ 1.04
SYNGR3-204ENST00000564642 PLXNA1Q9UIW2 1896 aa21.57■■□□□ 1.04
SYNGR3-204ENST00000564642 BRCA2P51587 3418 aa21.57■■□□□ 1.04
SYNGR3-204ENST00000564642 PGK2P07205 417 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 TRDNQ13061 729 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 KIAA1211Q6ZU35 1233 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 RASGRP2Q7LDG7 609 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 ANKLE1Q8NAG6 615 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 CHST13Q8NET6 341 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 MAML3Q96JK9 1138 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 FBXO40Q9UH90 709 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 PRR12Q9ULL5 1215 aa21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 DIS3Q9Y2L1 958 aaKnown RBP21.56■■□□□ 1.04
SYNGR3-204ENST00000564642 FRMPD2Q68DX3 1309 aaPredicted RBP21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 PDHBP11177 359 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 UBE2Q1Q7Z7E8 422 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 SKAP1Q86WV1 359 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 ZSCAN10Q96SZ4 725 aaPredicted RBP21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 UBAC1Q9BSL1 405 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 HTATIP2Q9BUP3 242 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 KAT14Q9H8E8 782 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 GPCPD1Q9NPB8 672 aa21.55■■□□□ 1.04
SYNGR3-204ENST00000564642 SLC16A2P36021 539 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 BMP2KLQ5H9B9 411 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 TTBK2Q6IQ55 1244 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 CCDC174Q6PII3 467 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 ANKRD35Q8N283 1001 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 DPF3Q92784 378 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 HOMER2Q9NSB8 354 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 OGDHLQ9ULD0 1010 aa21.54■■□□□ 1.04
SYNGR3-204ENST00000564642 MSCO60682 206 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 IGHA2P01877 340 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 CYP21A2P08686 494 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 FXR1P51114 621 aaKnown RBP eCLIP21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 SNAP25P60880 206 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 ZNF792Q3KQV3 632 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 BTNL9Q6UXG8 535 aa21.53■■□□□ 1.04
SYNGR3-204ENST00000564642 NECAB2Q7Z6G3 386 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms