RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 GOPCQ9HD26 462 aa17.91■□□□□ 0.46
SCAMP2-205ENST00000564529 PNMA3Q9UL41 463 aa17.91■□□□□ 0.46
SCAMP2-205ENST00000564529 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
SCAMP2-205ENST00000564529 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 BMP8BP34820 402 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 ANKLE1Q8NAG6 615 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 GMCL1Q96IK5 515 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 JAKMIP1Q96N16 626 aaKnown RBP17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 FEZ1Q99689 392 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 C22orf23Q9BZE7 217 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
SCAMP2-205ENST00000564529 SH2B2O14492 632 aaPredicted RBP17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 WDR46O15213 610 aaKnown RBP17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 PLA2G6O60733 806 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 NDUFB10O96000 172 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 HMGCRP04035 888 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 VCAM1P19320 739 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 RPS6KB1P23443 525 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 TRIM32Q13049 653 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 CATSPERGQ6ZRH7 1159 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 RUFY3Q7L099 469 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 KIF2CQ99661 725 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 GJD2Q9UKL4 321 aa17.89■□□□□ 0.45
SCAMP2-205ENST00000564529 CUL9Q8IWT3 2517 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 ERICH2A1L162 156 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L15C9J2P7 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L13C9JLJ4 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L11C9JVI0 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L18D6R9N7 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L22D6RA61 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L17D6RBQ6 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L19D6RCP7 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L20D6RJB6 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 GCLCP48506 637 aaPredicted RBP17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 MNX1P50219 401 aaPredicted RBP17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 EVCP57679 992 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 ATP2B2Q01814 1243 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 USP17L24Q0WX57 530 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 PABPC4Q13310 644 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 WTAPQ15007 396 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 TMEM67Q5HYA8 995 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 IFIT1BQ5T764 474 aaKnown RBP17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 MAP3K14Q99558 947 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 RPTORQ8N122 1335 aa17.88■□□□□ 0.45
SCAMP2-205ENST00000564529 LOC285556D6RIA3 1793 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 SYN1P17600 705 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 TROAPQ12815 778 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 GPR153Q6NV75 609 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 LBX2Q6XYB7 198 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 LRRC47Q8N1G4 583 aaKnown RBP17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 DEFB123Q8N688 67 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 PNMA1Q8ND90 353 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 DCAF4Q8WV16 495 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 KAT14Q9H8E8 782 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 SENP2Q9HC62 589 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 HMX1Q9NP08 348 aaPredicted RBP17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 CYP46A1Q9Y6A2 500 aa17.87■□□□□ 0.45
SCAMP2-205ENST00000564529 PDHBP11177 359 aa17.86■□□□□ 0.45
SCAMP2-205ENST00000564529 ZYXQ15942 572 aaKnown RBP17.86■□□□□ 0.45
SCAMP2-205ENST00000564529 Q7L0L9 218 aa17.86■□□□□ 0.45
SCAMP2-205ENST00000564529 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
SCAMP2-205ENST00000564529 GPHNQ9NQX3 736 aaPredicted RBP17.86■□□□□ 0.45
SCAMP2-205ENST00000564529 ADAMTS5Q9UNA0 930 aa17.86■□□□□ 0.45
SCAMP2-205ENST00000564529 BMP3P12645 472 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 CPA1P15085 419 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 SLC1A4P43007 532 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 MAGEA10P43363 369 aaPredicted RBP17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 RCAN1P53805 252 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 COG2Q14746 738 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 BTNL9Q6UXG8 535 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 SPICE1Q8N0Z3 855 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 C11orf49Q9H6J7 331 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 HOXC10Q9NYD6 342 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 OGDHLQ9ULD0 1010 aa17.85■□□□□ 0.45
SCAMP2-205ENST00000564529 DSG3P32926 999 aa17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 GPATCH4Q5T3I0 446 aaKnown RBP17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 TRIB2Q92519 343 aa17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 FEM1BQ9UK73 627 aa17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
SCAMP2-205ENST00000564529 DDAH1O94760 285 aa17.83■□□□□ 0.44
SCAMP2-205ENST00000564529 ZNF543Q08ER8 600 aa17.83■□□□□ 0.44
SCAMP2-205ENST00000564529 FAM83BQ5T0W9 1011 aa17.83■□□□□ 0.44
SCAMP2-205ENST00000564529 POTEEQ6S8J3 1075 aa17.83■□□□□ 0.44
SCAMP2-205ENST00000564529 Q6ZUG5 572 aa17.83■□□□□ 0.44
SCAMP2-205ENST00000564529 TCEANC2Q96MN5 208 aa17.83■□□□□ 0.44
SCAMP2-205ENST00000564529 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms