RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 GMCL1Q96IK5 515 aa17.81■□□□□ 0.44
SPG7-210ENST00000564409 RWDD1Q9H446 243 aaPredicted RBP17.81■□□□□ 0.44
SPG7-210ENST00000564409 SLC38A10Q9HBR0 1119 aa17.81■□□□□ 0.44
SPG7-210ENST00000564409 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
SPG7-210ENST00000564409 BMP3P12645 472 aa17.8■□□□□ 0.44
SPG7-210ENST00000564409 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
SPG7-210ENST00000564409 CHURC1Q8WUH1 139 aa17.8■□□□□ 0.44
SPG7-210ENST00000564409 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
SPG7-210ENST00000564409 SYNGAP1Q96PV0 1343 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 RANBP2P49792 3224 aaKnown RBP17.79■□□□□ 0.44
SPG7-210ENST00000564409 PLA2G6O60733 806 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 PGK2P07205 417 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 RARBP10826 455 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 SYN1P17600 705 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 MAGEA10P43363 369 aaPredicted RBP17.79■□□□□ 0.44
SPG7-210ENST00000564409 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 GPR153Q6NV75 609 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
SPG7-210ENST00000564409 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 CHST13Q8NET6 341 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 KIFC2Q96AC6 838 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
SPG7-210ENST00000564409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
SPG7-210ENST00000564409 ZMYM6O95789 1325 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 TSPY2A6NKD2 308 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 FOXP2O15409 715 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 ORC4O43929 436 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 FGRP09769 529 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 STAT2P52630 851 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 FAM47AQ5JRC9 791 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 PRAMEF19Q5SWL8 479 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
SPG7-210ENST00000564409 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
SPG7-210ENST00000564409 LRRC47Q8N1G4 583 aaKnown RBP17.78■□□□□ 0.44
SPG7-210ENST00000564409 PCP11498 1178 aaKnown RBP17.77■□□□□ 0.44
SPG7-210ENST00000564409 AKR1A1P14550 325 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 SLC1A4P43007 532 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 MFAP1P55081 439 aaKnown RBP17.77■□□□□ 0.44
SPG7-210ENST00000564409 LRRC41Q15345 812 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 LRIT3Q3SXY7 679 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 TDHQ8IZJ6 230 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 CPXCR1Q8N123 301 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 STAG1Q8WVM7 1258 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 UBE2OQ9C0C9 1292 aaKnown RBP17.77■□□□□ 0.44
SPG7-210ENST00000564409 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 RIPK3Q9Y572 518 aa17.77■□□□□ 0.44
SPG7-210ENST00000564409 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 NOVP48745 357 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 RTP1P59025 263 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 SNX17Q15036 470 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 TKFCQ3LXA3 575 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 SLC39A5Q6ZMH5 540 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 RNF180Q86T96 592 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 LBHD1Q9BQE6 289 aaPredicted RBP17.76■□□□□ 0.43
SPG7-210ENST00000564409 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
SPG7-210ENST00000564409 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
SPG7-210ENST00000564409 ZNF865P0CJ78 1059 aaPredicted RBP17.75■□□□□ 0.43
SPG7-210ENST00000564409 NT5C2P49902 561 aa17.75■□□□□ 0.43
SPG7-210ENST00000564409 ATN1P54259 1190 aaPredicted RBP17.75■□□□□ 0.43
SPG7-210ENST00000564409 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
SPG7-210ENST00000564409 ANKRD35Q8N283 1001 aa17.75■□□□□ 0.43
SPG7-210ENST00000564409 TSEN34Q9BSV6 310 aaKnown RBP17.75■□□□□ 0.43
SPG7-210ENST00000564409 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
SPG7-210ENST00000564409 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
SPG7-210ENST00000564409 RAVER2Q9HCJ3 691 aaKnown RBP17.75■□□□□ 0.43
SPG7-210ENST00000564409 PHF24Q9UPV7 400 aa17.75■□□□□ 0.43
SPG7-210ENST00000564409 MCM3APO60318 1980 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 TRIM6-TRIM34B2RNG4 842 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 FGAP02671 866 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 IKQ13123 557 aaPredicted RBP17.74■□□□□ 0.43
SPG7-210ENST00000564409 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 ANO1Q5XXA6 986 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 TCP11L1Q9NUJ3 509 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 FAM184BQ9ULE4 1060 aa17.74■□□□□ 0.43
SPG7-210ENST00000564409 A0A0D9SFI3 127 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 HSPD1P10809 573 aaKnown RBP17.73■□□□□ 0.43
SPG7-210ENST00000564409 MCCP23508 829 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 ADCYAP1R1P41586 468 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 NUCB1Q02818 461 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 FAM227BQ96M60 508 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
SPG7-210ENST00000564409 ABHD16BQ9H3Z7 469 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 ACAD9Q9H845 621 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 ISY1Q9ULR0 285 aaKnown RBP17.73■□□□□ 0.43
SPG7-210ENST00000564409 SZT2Q5T011 3432 aa17.73■□□□□ 0.43
SPG7-210ENST00000564409 CCDC171Q6TFL3 1326 aa17.72■□□□□ 0.43
SPG7-210ENST00000564409 SNAI1O95863 264 aaPredicted RBP17.72■□□□□ 0.43
SPG7-210ENST00000564409 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
SPG7-210ENST00000564409 TAL1P17542 331 aaPredicted RBP17.72■□□□□ 0.43
SPG7-210ENST00000564409 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
SPG7-210ENST00000564409 TTC14Q96N46 770 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms