RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 ATG4CQ96DT6 458 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 ZNF274Q96GC6 653 aaPredicted RBP18.09■□□□□ 0.49
CDH11-209ENST00000564317 PARK7Q99497 189 aaKnown RBP18.09■□□□□ 0.49
CDH11-209ENST00000564317 PNMA3Q9UL41 463 aa18.09■□□□□ 0.49
CDH11-209ENST00000564317 MYPNQ86TC9 1320 aa18.08■□□□□ 0.49
CDH11-209ENST00000564317 KLRF2D3W0D1 207 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 PEX10O60683 326 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 HERVK_113P62684 666 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 CCT2P78371 535 aaKnown RBP18.08■□□□□ 0.48
CDH11-209ENST00000564317 ST3GAL1Q11201 340 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 IKQ13123 557 aaPredicted RBP18.08■□□□□ 0.48
CDH11-209ENST00000564317 CRHR2Q13324 411 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 COG2Q14746 738 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 SYDE2Q5VT97 1194 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 TMTC3Q6ZXV5 915 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 CMTR1Q8N1G2 835 aaKnown RBP18.08■□□□□ 0.48
CDH11-209ENST00000564317 KIFC2Q96AC6 838 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 R3HDMLQ9H3Y0 253 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 NCOA5Q9HCD5 579 aaKnown RBP18.08■□□□□ 0.48
CDH11-209ENST00000564317 RNF186Q9NXI6 227 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 PRR12Q9ULL5 1215 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 A0A0G2JMZ2 1700 aa18.08■□□□□ 0.48
CDH11-209ENST00000564317 PFKFB2O60825 505 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 CNMDO75829 334 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 KIF5BP33176 963 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 SNAP25P60880 206 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 SCRN1Q12765 414 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 SRBD1Q8N5C6 995 aaKnown RBP18.07■□□□□ 0.48
CDH11-209ENST00000564317 CHURC1Q8WUH1 139 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 ADAMTS5Q9UNA0 930 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 LIMCH1Q9UPQ0 1083 aa18.07■□□□□ 0.48
CDH11-209ENST00000564317 CA12O43570 354 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 CYTH3O43739 400 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
CDH11-209ENST00000564317 FUT2Q10981 343 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 LBX2Q6XYB7 198 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 ADGRF4Q8IZF3 695 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 NECAB1Q8N987 351 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 PRPF38AQ8NAV1 312 aaKnown RBP18.06■□□□□ 0.48
CDH11-209ENST00000564317 REPS2Q8NFH8 660 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 TXNRD2Q9NNW7 524 aa18.06■□□□□ 0.48
CDH11-209ENST00000564317 RBM28Q9NW13 759 aaKnown RBP18.06■□□□□ 0.48
CDH11-209ENST00000564317 CNTNAP5Q8WYK1 1306 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 VWA5AO00534 786 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 TRPA1O75762 1119 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 GNAQP50148 359 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 SMCR8Q8TEV9 937 aaPredicted RBP18.05■□□□□ 0.48
CDH11-209ENST00000564317 SLKQ9H2G2 1235 aaPredicted RBP18.05■□□□□ 0.48
CDH11-209ENST00000564317 RIOX1Q9H6W3 641 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 JMJD4Q9H9V9 463 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 ZFYVE28Q9HCC9 887 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 HOXC10Q9NYD6 342 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 RBPJLQ9UBG7 517 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 CPA4Q9UI42 421 aa18.05■□□□□ 0.48
CDH11-209ENST00000564317 TBC1D8O95759 1140 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 TAL1P17542 331 aaPredicted RBP18.04■□□□□ 0.48
CDH11-209ENST00000564317 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
CDH11-209ENST00000564317 NTRK3Q16288 839 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 CCDC82Q8N4S0 544 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 JMYQ8N9B5 988 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 GTF3C6Q969F1 213 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 MTMR8Q96EF0 704 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 LZTS2Q9BRK4 669 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 PAGR1Q9BTK6 254 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 SPZ1Q9BXG8 430 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 CFHR5Q9BXR6 569 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 RANBP17Q9H2T7 1088 aaKnown RBP18.04■□□□□ 0.48
CDH11-209ENST00000564317 SLC38A10Q9HBR0 1119 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 VAT1LQ9HCJ6 419 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 WBP1LQ9NX94 342 aa18.04■□□□□ 0.48
CDH11-209ENST00000564317 ZNF536O15090 1300 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
CDH11-209ENST00000564317 TLR2O60603 784 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 DTNBO60941 627 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 PPFIA3O75145 1194 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 BCRP11274 1271 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 TMEM132BQ14DG7 1078 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 CDC37Q16543 378 aaPredicted RBP18.03■□□□□ 0.48
CDH11-209ENST00000564317 CCDC174Q6PII3 467 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 C17orf99Q6UX52 265 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 ANKRD13CQ8N6S4 541 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 TMX3Q96JJ7 454 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 SAGE1Q9NXZ1 904 aa18.03■□□□□ 0.48
CDH11-209ENST00000564317 CCDC196A0A1B0GTZ2 297 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 hCG_1642624A0A1W2PR95 340 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 ZBED4O75132 1171 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 CTDNEP1O95476 244 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 SMARCA1P28370 1054 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 GCLCP48506 637 aaPredicted RBP18.02■□□□□ 0.48
CDH11-209ENST00000564317 MCM2P49736 904 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 PPP2R5BQ15173 497 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 GTF3C2Q8WUA4 911 aaPredicted RBP18.02■□□□□ 0.48
CDH11-209ENST00000564317 PIBF1Q8WXW3 757 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
CDH11-209ENST00000564317 PIGSQ96S52 555 aa18.02■□□□□ 0.48
CDH11-209ENST00000564317 RAVER2Q9HCJ3 691 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms