RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 ZNF274Q96GC6 653 aaPredicted RBP12.48□□□□□ -0.41
TCF4-222ENST00000564228 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
TCF4-222ENST00000564228 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
TCF4-222ENST00000564228 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 HNRNPH1P31943 449 aaKnown RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 MAP9Q49MG5 647 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 ELOA2Q8IYF1 753 aaPredicted RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 STRBPQ96SI9 672 aaKnown RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 MXD3Q9BW11 206 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 SUFUQ9UMX1 484 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 CTAGE15A4D2H0 777 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 CTAGE9A4FU28 777 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 FOXP2O15409 715 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 CTAGE8P0CG41 777 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 GOLGA8FQ08AF8 430 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 GOLGA8DPQ0D2H9 430 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 DIXDC1Q155Q3 683 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 CTAGE6Q86UF2 777 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 CTAGE4Q8IX94 777 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 MRPL44Q9H9J2 332 aaKnown RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 AATFQ9NY61 560 aaKnown RBP eCLIP12.47□□□□□ -0.41
TCF4-222ENST00000564228 MYO1AQ9UBC5 1043 aa12.47□□□□□ -0.41
TCF4-222ENST00000564228 PUF60Q9UHX1 559 aaKnown RBP12.47□□□□□ -0.41
TCF4-222ENST00000564228 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.41
TCF4-222ENST00000564228 LRRIQ3A6PVS8 624 aaPredicted RBP12.46□□□□□ -0.42
TCF4-222ENST00000564228 EBAG9O00559 213 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 CYP21A2P08686 494 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 SETQ01105 290 aaPredicted RBP12.46□□□□□ -0.42
TCF4-222ENST00000564228 SATB1Q01826 763 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 KARSQ15046 597 aaKnown RBP12.46□□□□□ -0.42
TCF4-222ENST00000564228 KIF4BQ2VIQ3 1234 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 FBXL16Q8N461 479 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 KAT2BQ92831 832 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 HPSEQ9Y251 543 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 CLIC4Q9Y696 253 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 SLC4A4Q9Y6R1 1079 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 COL4A5P29400 1685 aa12.46□□□□□ -0.42
TCF4-222ENST00000564228 PRKAB2O43741 272 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 SYF2O95926 243 aaKnown RBP12.45□□□□□ -0.42
TCF4-222ENST00000564228 SYKP43405 635 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 MNAT1P51948 309 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 GSTO1P78417 241 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
TCF4-222ENST00000564228 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 CERS5Q8N5B7 392 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 PDILTQ8N807 584 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 FANCLQ9NW38 375 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 FGAP02671 866 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 ZNF18P17022 549 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
TCF4-222ENST00000564228 FOSBP53539 338 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 PRPF38AQ8NAV1 312 aaKnown RBP12.45□□□□□ -0.42
TCF4-222ENST00000564228 SDR42E1Q8WUS8 393 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
TCF4-222ENST00000564228 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.45□□□□□ -0.42
TCF4-222ENST00000564228 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 FAM169AQ9Y6X4 670 aa12.45□□□□□ -0.42
TCF4-222ENST00000564228 UTRNP46939 3433 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 USP17L3A6NCW0 530 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 USP17L4A6NCW7 530 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
TCF4-222ENST00000564228 NFKBIEO00221 500 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 PPP6R2O75170 966 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 GNAT2P19087 354 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 HAND2P61296 217 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 SYNE3Q6ZMZ3 975 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 SPATS2Q86XZ4 545 aaKnown RBP12.44□□□□□ -0.42
TCF4-222ENST00000564228 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
TCF4-222ENST00000564228 DESI2Q9BSY9 194 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 DACH1Q9UI36 760 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 HPCAL4Q9UM19 191 aa12.44□□□□□ -0.42
TCF4-222ENST00000564228 TTF2Q9UNY4 1162 aaKnown RBP12.44□□□□□ -0.42
TCF4-222ENST00000564228 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 A6NNZ2 444 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 GSG1L2A8MUP6 293 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 AKR1B15C9JRZ8 316 aaPredicted RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 ANKRD65E5RJM6 399 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 PHACTR2O75167 634 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 LDHCP07864 332 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 RHOXF2BP0C7M4 288 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 FECHP22830 423 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 PDIA3P30101 505 aaKnown RBP12.43□□□□□ -0.42
TCF4-222ENST00000564228 TDO2P48775 406 aa12.43□□□□□ -0.42
TCF4-222ENST00000564228 SCNN1DP51172 638 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms