RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 NECAB1Q8N987 351 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 FAM184AQ8NB25 1140 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 SMARCC2Q8TAQ2 1214 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 TRIB2Q92519 343 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
UBFD1-203ENST00000564106 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 EHD4Q9H223 541 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 ZSWIM5Q9P217 1185 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 MORF4L1Q9UBU8 362 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 SLC12A7Q9Y666 1083 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 GREB1LQ9C091 1923 aaPredicted RBP11.34□□□□□ -0.59
UBFD1-203ENST00000564106 FRMPD3Q5JV73 1810 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 MYH15Q9Y2K3 1946 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 H0YGN5 161 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 ZBTB43O43298 467 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 POLR3DP05423 398 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 GJB1P08034 283 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 CALM1P0DP23 149 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 CALM2P0DP24 149 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 CALM3P0DP25 149 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 SYT1P21579 422 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 METAP2P50579 478 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 IRF5Q13568 498 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 SEPT2Q15019 361 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 CCL14Q16627 93 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 SKOR2Q2VWA4 1001 aaPredicted RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 LARP1BQ659C4 914 aaKnown RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 APOA5Q6Q788 366 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 CYB5R4Q7L1T6 521 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 TTC6Q86TZ1 520 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 SLAIN1Q8ND83 568 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 IGDCC4Q8TDY8 1250 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 U2AF1L4Q8WU68 220 aaKnown RBP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
UBFD1-203ENST00000564106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBFD1-203ENST00000564106 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 HLA-DOAP06340 250 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 AKR1B1P15121 316 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 HOXD10P28358 340 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 CSPP1Q1MSJ5 1256 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 HABP4Q5JVS0 413 aaKnown RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 USP6NLQ92738 828 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 DEFB118Q96PH6 123 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 AS3MTQ9HBK9 375 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 PAK6Q9NQU5 681 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 BTBD7Q9P203 1132 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 BIN2Q9UBW5 565 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 MYH6P13533 1939 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 COL11A1P12107 1806 aaPredicted RBP11.32□□□□□ -0.6
UBFD1-203ENST00000564106 TNKSO95271 1327 aa11.32□□□□□ -0.6
UBFD1-203ENST00000564106 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 BAG4O95429 457 aaKnown RBP11.31□□□□□ -0.6
UBFD1-203ENST00000564106 VCAM1P19320 739 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 CYP2B6P20813 491 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 GCLCP48506 637 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-203ENST00000564106 IRX3P78415 501 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-203ENST00000564106 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 CERKLQ49MI3 558 aaPredicted RBP11.31□□□□□ -0.6
UBFD1-203ENST00000564106 IFIT1BQ5T764 474 aaKnown RBP11.31□□□□□ -0.6
UBFD1-203ENST00000564106 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
UBFD1-203ENST00000564106 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 C12orf42Q96LP6 360 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 FLRT1Q9NZU1 646 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 SWAP70Q9UH65 585 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 BRPF3Q9ULD4 1205 aa11.31□□□□□ -0.6
UBFD1-203ENST00000564106 LAMA3Q16787 3333 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 VPS37CA5D8V6 355 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 H3BQV1 296 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 DDAH1O94760 285 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 SGPL1O95470 568 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 F13A1P00488 732 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 ERVK-24P63145 666 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 CCT2P78371 535 aaKnown RBP11.3□□□□□ -0.6
UBFD1-203ENST00000564106 PKP1Q13835 747 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 C16orf86Q6ZW13 317 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 CATIPQ7Z7H3 387 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
UBFD1-203ENST00000564106 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms