RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 CFAP58Q5T655 872 aa14.23□□□□□ -0.13
CCDC187-201ENST00000563590 TRMT1LQ7Z2T5 733 aaKnown RBP14.23□□□□□ -0.13
CCDC187-201ENST00000563590 NWD2Q9ULI1 1742 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 RPS6KA5O75582 802 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 CD44P16070 742 aaKnown RBP14.22□□□□□ -0.13
CCDC187-201ENST00000563590 PTPREP23469 700 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 PAFAH1B1P43034 410 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 GYG1P46976 350 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 GUCY1A3Q02108 690 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 B4GALNT4Q76KP1 1039 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
CCDC187-201ENST00000563590 TRIM47Q96LD4 638 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 GYPCP04921 128 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 MYBL2P10244 700 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 KIF5AQ12840 1032 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 EZH2Q15910 746 aaKnown RBP14.22□□□□□ -0.13
CCDC187-201ENST00000563590 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 CCDC121Q6ZUS5 278 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 FAM217BQ9NTX9 383 aaPredicted RBP14.22□□□□□ -0.13
CCDC187-201ENST00000563590 CDHR2Q9BYE9 1310 aa14.22□□□□□ -0.13
CCDC187-201ENST00000563590 ESYT3A0FGR9 886 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 SMIM22K7EJ46 135 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 ERVK-24P63145 666 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 TUBB4BP68371 445 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 ADD3Q9UEY8 706 aaKnown RBP14.21□□□□□ -0.13
CCDC187-201ENST00000563590 ZNF142P52746 1687 aaPredicted RBP14.21□□□□□ -0.13
CCDC187-201ENST00000563590 ACTN4O43707 911 aaKnown RBP14.21□□□□□ -0.13
CCDC187-201ENST00000563590 NDUFA10O95299 355 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 SEC24CP53992 1094 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 KANK3Q6NY19 840 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 ABHD10Q9NUJ1 306 aa14.21□□□□□ -0.13
CCDC187-201ENST00000563590 KRT14P02533 472 aa14.21□□□□□ -0.14
CCDC187-201ENST00000563590 IGHMBP2P38935 993 aaKnown RBP14.21□□□□□ -0.14
CCDC187-201ENST00000563590 TUBB2AQ13885 445 aa14.21□□□□□ -0.14
CCDC187-201ENST00000563590 KRT31Q15323 416 aa14.21□□□□□ -0.14
CCDC187-201ENST00000563590 TUBB2BQ9BVA1 445 aa14.21□□□□□ -0.14
CCDC187-201ENST00000563590 VPS54Q9P1Q0 977 aa14.21□□□□□ -0.14
CCDC187-201ENST00000563590 USP54Q70EL1 1684 aa14.21□□□□□ -0.14
CCDC187-201ENST00000563590 ERCC5P28715 1186 aaPredicted RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 MAP3K12Q12852 859 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 LRCH2Q5VUJ6 765 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 CEP89Q96ST8 783 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 EHD2Q9NZN4 543 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 CEP131Q9UPN4 1083 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 WDR19Q8NEZ3 1342 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 AKR1B10O60218 316 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 APBA1Q02410 837 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 SF3B2Q13435 895 aaKnown RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 TRIML1Q8N9V2 468 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 VEZTQ9HBM0 779 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 TRIM75PA6NK02 468 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 EIF4E1BA6NMX2 242 aaKnown RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 KCNJ18B7U540 433 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 F8W031 263 aaPredicted RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 HGSO14964 777 aaPredicted RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 PPP1R12BO60237 982 aaPredicted RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 MARCH6O60337 910 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 PBX1P40424 430 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 MTIF2P46199 727 aaKnown RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 KCNJ12Q14500 433 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 MSL3Q8N5Y2 521 aaKnown RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 ARL8AQ96BM9 186 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 CCDC43Q96MW1 224 aaKnown RBP14.2□□□□□ -0.14
CCDC187-201ENST00000563590 BAIAP2L1Q9UHR4 511 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 DUSP10Q9Y6W6 482 aa14.2□□□□□ -0.14
CCDC187-201ENST00000563590 CCDC196A0A1B0GTZ2 297 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 RNF225M0QZC1 329 aaPredicted RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 SKAP2O75563 359 aaPredicted RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 EZRP15311 586 aaKnown RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 CYLC1P35663 651 aaPredicted RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 ARHGAP25P42331 645 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 FAM47AQ5JRC9 791 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 C8orf74Q6P047 294 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 NELFBQ8WX92 580 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 LY9Q9HBG7 655 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 MCAMP43121 646 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 NNTQ13423 1086 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 TTF1Q15361 905 aaPredicted RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 RTN1Q16799 776 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 ELOA2Q8IYF1 753 aaPredicted RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 IGDCC4Q8TDY8 1250 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 HDAC7Q8WUI4 952 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 NACAP1Q9BZK3 213 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 PIH1D3Q9NQM4 214 aaKnown RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 A0A087X0B3 334 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 FAM205CA6NFA0 338 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 MMP1P03956 469 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 COPB1P53618 953 aaKnown RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 NEDD9Q14511 834 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 TDRD12Q587J7 1177 aaKnown RBP14.19□□□□□ -0.14
CCDC187-201ENST00000563590 OR8K1Q8NGG5 319 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 OXER1Q8TDS5 423 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 LRRC1Q9BTT6 524 aa14.19□□□□□ -0.14
CCDC187-201ENST00000563590 C4AP0C0L4 1744 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms