RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 COL25A1Q9BXS0 654 aaPredicted RBP12.9□□□□□ -0.34
FANCA-211ENST00000563510 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
FANCA-211ENST00000563510 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
FANCA-211ENST00000563510 ATP8A2Q9NTI2 1148 aa12.9□□□□□ -0.34
FANCA-211ENST00000563510 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
FANCA-211ENST00000563510 GOLIM4O00461 696 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 COBLO75128 1261 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 RLBP1P12271 317 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 COPB2P35606 906 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 SMAD3P84022 425 aaKnown RBP12.89□□□□□ -0.35
FANCA-211ENST00000563510 LRRC41Q15345 812 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 TRIM60Q495X7 471 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 ANO1Q5XXA6 986 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 DIEXFQ68CQ4 756 aaKnown RBP12.89□□□□□ -0.35
FANCA-211ENST00000563510 LCORLQ8N3X6 602 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 RHPN1Q8TCX5 695 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 ATG4CQ96DT6 458 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 KIF1BPQ96EK5 621 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
FANCA-211ENST00000563510 IL1RAPL2Q9NP60 686 aa12.89□□□□□ -0.35
FANCA-211ENST00000563510 TCRBV5S4A2TA0A5A2 114 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
FANCA-211ENST00000563510 RARBP10826 455 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 ADCYAP1R1P41586 468 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 SHHQ15465 462 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 RNF180Q86T96 592 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 SLC44A5Q8NCS7 719 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 BADQ92934 168 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.351e-7■■■■■ 40.3
FANCA-211ENST00000563510 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 PHF24Q9UPV7 400 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 PRUNE2Q8WUY3 3088 aa12.88□□□□□ -0.35
FANCA-211ENST00000563510 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 HMMRO75330 724 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 MS4A1P11836 297 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 KCTD2Q14681 263 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 C9orf50Q5SZB4 431 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
FANCA-211ENST00000563510 MMP19Q99542 508 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 CDX2Q99626 313 aaPredicted RBP12.87□□□□□ -0.35
FANCA-211ENST00000563510 GOPCQ9HD26 462 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
FANCA-211ENST00000563510 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
FANCA-211ENST00000563510 MBD4O95243 580 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 CLTBP09497 229 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 CYP2D6P10635 497 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 AKR1B1P15121 316 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 ADD2P35612 726 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 AMHR2Q16671 573 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 RIOX2Q8IUF8 465 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 PAG1Q9NWQ8 432 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 GBF1Q92538 1859 aa12.86□□□□□ -0.35
FANCA-211ENST00000563510 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 AKR1A1P14550 325 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 CDK8P49336 464 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
FANCA-211ENST00000563510 TLE2Q04725 743 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 PTGDRQ13258 359 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
FANCA-211ENST00000563510 RNPC3Q96LT9 517 aaKnown RBP12.85□□□□□ -0.35
FANCA-211ENST00000563510 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 CNPY2Q9Y2B0 182 aa12.85□□□□□ -0.35
FANCA-211ENST00000563510 A0A1W2PQ45 241 aaPredicted RBP12.84□□□□□ -0.35
FANCA-211ENST00000563510 A0A1W2PQY0 241 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 APBB1O00213 710 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 VWA5AO00534 786 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 EEF2P13639 858 aaKnown RBP12.84□□□□□ -0.35
FANCA-211ENST00000563510 RAG1P15918 1043 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 STAT3P40763 770 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 ZNF792Q3KQV3 632 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 SIAH1Q8IUQ4 282 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
FANCA-211ENST00000563510 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
FANCA-211ENST00000563510 TSEN34Q9BSV6 310 aaKnown RBP12.84□□□□□ -0.35
FANCA-211ENST00000563510 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
FANCA-211ENST00000563510 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
FANCA-211ENST00000563510 LRRC37A2A6NM11 1700 aa12.83□□□□□ -0.36
FANCA-211ENST00000563510 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
FANCA-211ENST00000563510 USP17L21D6R901 530 aa12.83□□□□□ -0.36
FANCA-211ENST00000563510 KIAA0355O15063 1070 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms