RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KCTD1Q719H9 257 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 NPLOC4Q8TAT6 608 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 FLRT1Q9NZU1 646 aa33.35■■■□□ 2.93
NME3-203ENST00000563367 HOXC6P09630 235 aa33.34■■■□□ 2.93
NME3-203ENST00000563367 GJA8P48165 433 aa33.34■■■□□ 2.93
NME3-203ENST00000563367 TRMT44Q8IYL2 757 aaKnown RBP33.34■■■□□ 2.93
NME3-203ENST00000563367 SLC38A10Q9HBR0 1119 aa33.34■■■□□ 2.93
NME3-203ENST00000563367 PAK6Q9NQU5 681 aaPredicted RBP33.34■■■□□ 2.93
NME3-203ENST00000563367 PDE4DIPQ5VU43 2346 aa33.34■■■□□ 2.93
NME3-203ENST00000563367 PLXNA1Q9UIW2 1896 aa33.33■■■□□ 2.93
NME3-203ENST00000563367 STAT2P52630 851 aa33.33■■■□□ 2.93
NME3-203ENST00000563367 TTC14Q96N46 770 aa33.33■■■□□ 2.93
NME3-203ENST00000563367 ZSWIM5Q9P217 1185 aa33.33■■■□□ 2.93
NME3-203ENST00000563367 ZBED4O75132 1171 aa33.32■■■□□ 2.92
NME3-203ENST00000563367 MAP3K21Q5TCX8 1036 aa33.32■■■□□ 2.92
NME3-203ENST00000563367 CPXCR1Q8N123 301 aa33.32■■■□□ 2.92
NME3-203ENST00000563367 DCAF4Q8WV16 495 aa33.32■■■□□ 2.92
NME3-203ENST00000563367 TEX13BQ9BXU2 312 aa33.32■■■□□ 2.92
NME3-203ENST00000563367 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.32■■■□□ 2.921e-12■■□□□ 11.8
NME3-203ENST00000563367 RIPK3Q9Y572 518 aa33.32■■■□□ 2.92
NME3-203ENST00000563367 COBLO75128 1261 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 CYP21A2P08686 494 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 PRKAR2AP13861 404 aaKnown RBP33.31■■■□□ 2.92
NME3-203ENST00000563367 NT5C2P49902 561 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 SNRNP48Q6IEG0 339 aaKnown RBP33.31■■■□□ 2.92
NME3-203ENST00000563367 DPP9Q86TI2 863 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 FAM160B2Q86V87 743 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 ABRAQ8N0Z2 381 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 U2AF1L4Q8WU68 220 aaKnown RBP33.31■■■□□ 2.92
NME3-203ENST00000563367 CHURC1Q8WUH1 139 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 DEFB118Q96PH6 123 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 RAVER2Q9HCJ3 691 aaKnown RBP33.31■■■□□ 2.92
NME3-203ENST00000563367 U3KPZ7 1027 aaPredicted RBP33.31■■■□□ 2.92
NME3-203ENST00000563367 SMCHD1A6NHR9 2005 aa33.31■■■□□ 2.92
NME3-203ENST00000563367 RPTORQ8N122 1335 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 ATP2A1O14983 1001 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 PLA2G6O60733 806 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 SGPL1O95470 568 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 FCER1AP12319 257 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 CACNB2Q08289 660 aaPredicted RBP33.3■■■□□ 2.92
NME3-203ENST00000563367 MAP4K1Q92918 833 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 ESYT1Q9BSJ8 1104 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 KRT23Q9C075 422 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 HMX1Q9NP08 348 aaPredicted RBP33.3■■■□□ 2.92
NME3-203ENST00000563367 TAF6LQ9Y6J9 622 aa33.3■■■□□ 2.92
NME3-203ENST00000563367 IKQ13123 557 aaPredicted RBP33.29■■■□□ 2.92
NME3-203ENST00000563367 CCDC96Q2M329 555 aa33.29■■■□□ 2.92
NME3-203ENST00000563367 IQCA1Q86XH1 822 aa33.29■■■□□ 2.92
NME3-203ENST00000563367 CNNM2Q9H8M5 875 aa33.29■■■□□ 2.92
NME3-203ENST00000563367 CTDP1Q9Y5B0 961 aaPredicted RBP33.29■■■□□ 2.92
NME3-203ENST00000563367 COPB2P35606 906 aa33.28■■■□□ 2.92
NME3-203ENST00000563367 TTBK2Q6IQ55 1244 aa33.28■■■□□ 2.92
NME3-203ENST00000563367 DGKHQ86XP1 1220 aa33.28■■■□□ 2.92
NME3-203ENST00000563367 MMP19Q99542 508 aa33.28■■■□□ 2.92
NME3-203ENST00000563367 IGHA2P01877 340 aa33.27■■■□□ 2.92
NME3-203ENST00000563367 PDHBP11177 359 aa33.27■■■□□ 2.92
NME3-203ENST00000563367 SLC4A3P48751 1232 aa33.27■■■□□ 2.92
NME3-203ENST00000563367 ZSCAN10Q96SZ4 725 aaPredicted RBP33.27■■■□□ 2.92
NME3-203ENST00000563367 PRR12Q9ULL5 1215 aa33.27■■■□□ 2.92
NME3-203ENST00000563367 FRMPD2Q68DX3 1309 aaPredicted RBP33.27■■■□□ 2.92
NME3-203ENST00000563367 CENPBP07199 599 aaPredicted RBP33.26■■■□□ 2.91
NME3-203ENST00000563367 OAZ1P54368 228 aa33.26■■■□□ 2.91
NME3-203ENST00000563367 SNAP25P60880 206 aa33.26■■■□□ 2.91
NME3-203ENST00000563367 ENAHQ8N8S7 591 aaPredicted RBP33.26■■■□□ 2.91
NME3-203ENST00000563367 ANKS1AQ92625 1134 aa33.26■■■□□ 2.91
NME3-203ENST00000563367 LSG1Q9H089 658 aaKnown RBP33.26■■■□□ 2.91
NME3-203ENST00000563367 GPCPD1Q9NPB8 672 aa33.26■■■□□ 2.91
NME3-203ENST00000563367 RBM8AQ9Y5S9 174 aaKnown RBP33.26■■■□□ 2.91
NME3-203ENST00000563367 PGK2P07205 417 aa33.25■■■□□ 2.91
NME3-203ENST00000563367 FDX1P10109 184 aa33.25■■■□□ 2.91
NME3-203ENST00000563367 CCND3P30281 292 aaPredicted RBP33.25■■■□□ 2.91
NME3-203ENST00000563367 CCDC178Q5BJE1 867 aa33.25■■■□□ 2.91
NME3-203ENST00000563367 CYB5R4Q7L1T6 521 aa33.25■■■□□ 2.91
NME3-203ENST00000563367 CRISPLD2Q9H0B8 497 aa33.25■■■□□ 2.91
NME3-203ENST00000563367 ZNF536O15090 1300 aa33.25■■■□□ 2.91
NME3-203ENST00000563367 CYP2C19P33261 490 aa33.24■■■□□ 2.91
NME3-203ENST00000563367 SLC16A2P36021 539 aa33.24■■■□□ 2.91
NME3-203ENST00000563367 KCTD2Q14681 263 aa33.24■■■□□ 2.91
NME3-203ENST00000563367 MFSD14CQ5VZR4 134 aa33.24■■■□□ 2.91
NME3-203ENST00000563367 BTNL9Q6UXG8 535 aa33.24■■■□□ 2.91
NME3-203ENST00000563367 TNKSO95271 1327 aa33.24■■■□□ 2.91
NME3-203ENST00000563367 TFRCP02786 760 aaKnown RBP33.23■■■□□ 2.91
NME3-203ENST00000563367 SNHG28P0DPA3 235 aa33.23■■■□□ 2.91
NME3-203ENST00000563367 OLFML2BQ68BL8 750 aa33.23■■■□□ 2.91
NME3-203ENST00000563367 KIAA1211Q6ZU35 1233 aa33.23■■■□□ 2.91
NME3-203ENST00000563367 STOX1Q6ZVD7 989 aa33.23■■■□□ 2.91
NME3-203ENST00000563367 AGBL1Q96MI9 1066 aa33.23■■■□□ 2.91
NME3-203ENST00000563367 FRMPD3Q5JV73 1810 aa33.23■■■□□ 2.91
NME3-203ENST00000563367 E7EWF7 191 aa33.22■■■□□ 2.91
NME3-203ENST00000563367 ZNF543Q08ER8 600 aa33.22■■■□□ 2.91
NME3-203ENST00000563367 MAML3Q96JK9 1138 aa33.22■■■□□ 2.91
NME3-203ENST00000563367 SLC5A4Q9NY91 659 aa33.22■■■□□ 2.91
NME3-203ENST00000563367 CCDC174Q6PII3 467 aa33.21■■■□□ 2.91
NME3-203ENST00000563367 UBE2Q1Q7Z7E8 422 aa33.21■■■□□ 2.91
NME3-203ENST00000563367 PNMA1Q8ND90 353 aa33.21■■■□□ 2.91
NME3-203ENST00000563367 UBAC1Q9BSL1 405 aa33.21■■■□□ 2.91
NME3-203ENST00000563367 TRDNQ13061 729 aa33.2■■■□□ 2.91
NME3-203ENST00000563367 ZNF792Q3KQV3 632 aa33.2■■■□□ 2.91
NME3-203ENST00000563367 SYDE2Q5VT97 1194 aa33.2■■■□□ 2.91
NME3-203ENST00000563367 TRPV1Q8NER1 839 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms