RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
CDH11-207ENST00000563255 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 NBPF11Q86T75 865 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 STK36Q9NRP7 1315 aa17.13■□□□□ 0.33
CDH11-207ENST00000563255 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
CDH11-207ENST00000563255 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 CXCL11O14625 94 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 FUT2Q10981 343 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 PPIL2Q13356 520 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 MTMR2Q13614 643 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 KIAA1755Q5JYT7 1200 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 SRBD1Q8N5C6 995 aaKnown RBP17.12■□□□□ 0.33
CDH11-207ENST00000563255 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
CDH11-207ENST00000563255 EMILIN3Q9NT22 766 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 KCNH4Q9UQ05 1017 aa17.12■□□□□ 0.33
CDH11-207ENST00000563255 PTPDC1A2A3K4 754 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 TRIM75PA6NK02 468 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 WDR46O15213 610 aaKnown RBP17.11■□□□□ 0.33
CDH11-207ENST00000563255 RAD21O60216 631 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 PLA2G6O60733 806 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 PLEKHA8P1O95397 391 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
CDH11-207ENST00000563255 GJB2P29033 226 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 GJA5P36382 358 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
CDH11-207ENST00000563255 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
CDH11-207ENST00000563255 CCDC96Q2M329 555 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 RASGRP2Q7LDG7 609 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 OPTNQ96CV9 577 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
CDH11-207ENST00000563255 CNTNAP5Q8WYK1 1306 aa17.11■□□□□ 0.33
CDH11-207ENST00000563255 MKI67P46013 3256 aaKnown RBP17.1■□□□□ 0.33
CDH11-207ENST00000563255 PRPF3O43395 683 aaKnown RBP17.1■□□□□ 0.33
CDH11-207ENST00000563255 JAK2O60674 1132 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 GOLGA8HP0CJ92 632 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 CRHR2Q13324 411 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 BTNL9Q6UXG8 535 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 KCTD1Q719H9 257 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 OTOP1Q7RTM1 612 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 SPICE1Q8N0Z3 855 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 CMTR1Q8N1G2 835 aaKnown RBP17.1■□□□□ 0.33
CDH11-207ENST00000563255 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 OTUD5Q96G74 571 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 PTPN18Q99952 460 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 GPCPD1Q9NPB8 672 aa17.1■□□□□ 0.33
CDH11-207ENST00000563255 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
CDH11-207ENST00000563255 CENPFP49454 3210 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 IRF6O14896 467 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 CYTH3O43739 400 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 PDIA4P13667 645 aaKnown RBP17.09■□□□□ 0.33
CDH11-207ENST00000563255 FDPSP14324 419 aaKnown RBP17.09■□□□□ 0.33
CDH11-207ENST00000563255 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 RGS22Q8NE09 1264 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 PHKBQ93100 1093 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 ERO1AQ96HE7 468 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 TMOD4Q9NZQ9 345 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 ORC3Q9UBD5 711 aaPredicted RBP17.09■□□□□ 0.33
CDH11-207ENST00000563255 FEM1BQ9UK73 627 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
CDH11-207ENST00000563255 A0A0G2JLL6 359 aaPredicted RBP17.08■□□□□ 0.32
CDH11-207ENST00000563255 TMEM232C9JQI7 657 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 DEXIO95424 95 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 DDIT3P35638 169 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 HMGCS2P54868 508 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 FAM83BQ5T0W9 1011 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 PRRT2Q7Z6L0 340 aaPredicted RBP17.08■□□□□ 0.32
CDH11-207ENST00000563255 FAM160B2Q86V87 743 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
CDH11-207ENST00000563255 CD99L2Q8TCZ2 262 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 CHURC1Q8WUH1 139 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 WASF1Q92558 559 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 NUP88Q99567 741 aaPredicted RBP17.08■□□□□ 0.32
CDH11-207ENST00000563255 SLC26A6Q9BXS9 759 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 UBA5Q9GZZ9 404 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 HTTP42858 3142 aa17.08■□□□□ 0.32
CDH11-207ENST00000563255 TESPA1A2RU30 521 aaPredicted RBP17.07■□□□□ 0.32
CDH11-207ENST00000563255 VCAM1P19320 739 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 STAT2P52630 851 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
CDH11-207ENST00000563255 SP3Q02447 781 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 DDX11Q96FC9 970 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
CDH11-207ENST00000563255 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
CDH11-207ENST00000563255 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
CDH11-207ENST00000563255 PDCP20941 246 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms