RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 LRRC26Q2I0M4 334 aa18.69■□□□□ 0.58
SF3B3-203ENST00000562874 SLFN13Q68D06 897 aa18.69■□□□□ 0.58
SF3B3-203ENST00000562874 ABRAQ8N0Z2 381 aa18.69■□□□□ 0.58
SF3B3-203ENST00000562874 PRO3102Q9H379 93 aa18.69■□□□□ 0.58
SF3B3-203ENST00000562874 MTMR7Q9Y216 660 aa18.69■□□□□ 0.58
SF3B3-203ENST00000562874 RIPK3Q9Y572 518 aa18.69■□□□□ 0.58
SF3B3-203ENST00000562874 TSPY2A6NKD2 308 aa18.68■□□□□ 0.58
SF3B3-203ENST00000562874 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
SF3B3-203ENST00000562874 KCTD2Q14681 263 aa18.68■□□□□ 0.58
SF3B3-203ENST00000562874 TEX13BQ9BXU2 312 aa18.68■□□□□ 0.58
SF3B3-203ENST00000562874 RWDD1Q9H446 243 aaPredicted RBP18.68■□□□□ 0.58
SF3B3-203ENST00000562874 RAVER2Q9HCJ3 691 aaKnown RBP18.68■□□□□ 0.58
SF3B3-203ENST00000562874 HELLSQ9NRZ9 838 aa18.68■□□□□ 0.58
SF3B3-203ENST00000562874 SLC5A4Q9NY91 659 aa18.68■□□□□ 0.58
SF3B3-203ENST00000562874 RANBP6O60518 1105 aaKnown RBP18.67■□□□□ 0.58
SF3B3-203ENST00000562874 MSCO60682 206 aa18.67■□□□□ 0.58
SF3B3-203ENST00000562874 GJC2Q5T442 439 aaPredicted RBP18.67■□□□□ 0.58
SF3B3-203ENST00000562874 CHD1LQ86WJ1 897 aa18.67■□□□□ 0.58
SF3B3-203ENST00000562874 GMCL1P1Q8NEA9 526 aa18.67■□□□□ 0.58
SF3B3-203ENST00000562874 MKL1Q969V6 931 aa18.67■□□□□ 0.58
SF3B3-203ENST00000562874 SENP6Q9GZR1 1112 aaPredicted RBP18.67■□□□□ 0.58
SF3B3-203ENST00000562874 TOMM22Q9NS69 142 aa18.67■□□□□ 0.58
SF3B3-203ENST00000562874 STX8Q9UNK0 236 aa18.67■□□□□ 0.58
SF3B3-203ENST00000562874 RANBP2P49792 3224 aaKnown RBP18.67■□□□□ 0.58
SF3B3-203ENST00000562874 BMP3P12645 472 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 ATN1P54259 1190 aaPredicted RBP18.66■□□□□ 0.58
SF3B3-203ENST00000562874 HAND2P61296 217 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 AAMPQ13685 434 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 MCMDC2Q4G0Z9 681 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 RRP12Q5JTH9 1297 aaKnown RBP18.66■□□□□ 0.58
SF3B3-203ENST00000562874 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 PRPF38AQ8NAV1 312 aaKnown RBP18.66■□□□□ 0.58
SF3B3-203ENST00000562874 LENG1Q96BZ8 264 aaPredicted RBP18.66■□□□□ 0.58
SF3B3-203ENST00000562874 CTDP1Q9Y5B0 961 aaPredicted RBP18.66■□□□□ 0.58
SF3B3-203ENST00000562874 SUPT16HQ9Y5B9 1047 aaKnown RBP18.66■□□□□ 0.58
SF3B3-203ENST00000562874 DNAH12Q6ZR08 3092 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 CCDC171Q6TFL3 1326 aa18.66■□□□□ 0.58
SF3B3-203ENST00000562874 TMEM232C9JQI7 657 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 SEPT4O43236 478 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 TAL1P17542 331 aaPredicted RBP18.65■□□□□ 0.58
SF3B3-203ENST00000562874 COPB2P35606 906 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
SF3B3-203ENST00000562874 NUCB1Q02818 461 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 IKQ13123 557 aaPredicted RBP18.65■□□□□ 0.58
SF3B3-203ENST00000562874 ZNF792Q3KQV3 632 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 KCTD1Q719H9 257 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 SLC38A10Q9HBR0 1119 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 IL17RBQ9NRM6 502 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 HOMER2Q9NSB8 354 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 FEM1BQ9UK73 627 aa18.65■□□□□ 0.58
SF3B3-203ENST00000562874 DNM1LO00429 736 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 ZBED4O75132 1171 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 HSPD1P10809 573 aaKnown RBP18.64■□□□□ 0.57
SF3B3-203ENST00000562874 MCCP23508 829 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 TINF2Q9BSI4 451 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 ANAPC4Q9UJX5 808 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 SYNPO2Q9UMS6 1093 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
SF3B3-203ENST00000562874 FGAP02671 866 aa18.63■□□□□ 0.57
SF3B3-203ENST00000562874 SLC1A4P43007 532 aa18.63■□□□□ 0.57
SF3B3-203ENST00000562874 MAGEA10P43363 369 aaPredicted RBP18.63■□□□□ 0.57
SF3B3-203ENST00000562874 STAT2P52630 851 aa18.63■□□□□ 0.57
SF3B3-203ENST00000562874 SNAP25P60880 206 aa18.63■□□□□ 0.57
SF3B3-203ENST00000562874 KBTBD13C9JR72 458 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 ORC4O43929 436 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 SDSP20132 328 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 ALX1Q15699 326 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 TBC1D10CQ8IV04 446 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 GDF15Q99988 308 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 ZMYM6O95789 1325 aa18.62■□□□□ 0.57
SF3B3-203ENST00000562874 NEDD4P46934 1319 aa18.61■□□□□ 0.57
SF3B3-203ENST00000562874 SOX1O00570 391 aaPredicted RBP18.61■□□□□ 0.57
SF3B3-203ENST00000562874 ATP2A1O14983 1001 aa18.61■□□□□ 0.57
SF3B3-203ENST00000562874 RTP1P59025 263 aa18.61■□□□□ 0.57
SF3B3-203ENST00000562874 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
SF3B3-203ENST00000562874 CCDC174Q6PII3 467 aa18.61■□□□□ 0.57
SF3B3-203ENST00000562874 GMCL1Q96IK5 515 aa18.61■□□□□ 0.57
SF3B3-203ENST00000562874 DIS3Q9Y2L1 958 aaKnown RBP18.61■□□□□ 0.57
SF3B3-203ENST00000562874 ZNF536O15090 1300 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 FRMPD2Q68DX3 1309 aaPredicted RBP18.6■□□□□ 0.57
SF3B3-203ENST00000562874 DNAJC25-GNG10A0A024R161 153 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 PGK1P00558 417 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 ZNF865P0CJ78 1059 aaPredicted RBP18.6■□□□□ 0.57
SF3B3-203ENST00000562874 MDM2Q00987 491 aaPredicted RBP18.6■□□□□ 0.57
SF3B3-203ENST00000562874 LRRC41Q15345 812 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
SF3B3-203ENST00000562874 ANKRD35Q8N283 1001 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 FERMT2Q96AC1 680 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 FGD4Q96M96 766 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 AGBL1Q96MI9 1066 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 OSBPL3Q9H4L5 887 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 XPNPEP3Q9NQH7 507 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 ZHX1Q9UKY1 873 aaPredicted RBP18.6■□□□□ 0.57
SF3B3-203ENST00000562874 ATP11BQ9Y2G3 1177 aa18.6■□□□□ 0.57
SF3B3-203ENST00000562874 RARBP10826 455 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 FAM160B2Q86V87 743 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 ARRDC4Q8NCT1 418 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 STAG1Q8WVM7 1258 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 LRCH3Q96II8 777 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms