RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 ROBO3Q96MS0 1386 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 KIAA0100Q14667 2235 aaKnown RBP11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SLC15A5A6NIM6 579 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TTLL1O95922 423 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 IGHDP01880 384 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 XRCC5P13010 732 aaKnown RBP11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 CAPN2P17655 700 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 PTPREP23469 700 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TFAP4Q01664 338 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 IKQ13123 557 aaPredicted RBP11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 MAP2K5Q13163 448 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 TRIB2Q92519 343 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SPATC1LQ9H0A9 340 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 MROH8Q9H579 483 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 SALL3Q9BXA9 1300 aa11.03□□□□□ -0.64
CHRFAM7A-204ENST00000562729 F5H6K3 240 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 HIP1O00291 1037 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 STRNO43815 780 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 RANBP6O60518 1105 aaKnown RBP11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CNMDO75829 334 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CNGA1P29973 690 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CTDSPL2Q05D32 466 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 KLRC3Q07444 240 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 FAM47AQ5JRC9 791 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 RRP12Q5JTH9 1297 aaKnown RBP11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 KIAA1755Q5JYT7 1200 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 MORN1Q5T089 497 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SIAH1Q8IUQ4 282 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 ATG4CQ96DT6 458 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CEP95Q96GE4 821 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 FAM227BQ96M60 508 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NYAP2Q9P242 653 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 STX8Q9UNK0 236 aa11.02□□□□□ -0.65
CHRFAM7A-204ENST00000562729 DOCK3Q8IZD9 2030 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PDE4DIPQ5VU43 2346 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 ZBED4O75132 1171 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SLC25A27O95847 323 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 FCER1AP12319 257 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 ERCC3P19447 782 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 ADORA2AP29274 412 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 TRIM32Q13049 653 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NMIQ13287 307 aaPredicted RBP11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 KCTD2Q14681 263 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CCL14Q16627 93 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SHCBP1Q8NEM2 672 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SHISA4Q96DD7 197 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NUP88Q99567 741 aaPredicted RBP11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CCDC171Q6TFL3 1326 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 MYH4Q9Y623 1939 aa11.01□□□□□ -0.65
CHRFAM7A-204ENST00000562729 BRCA2P51587 3418 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PLXNB2O15031 1838 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 A0A0D9SFI3 127 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 VWA5AO00534 786 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NDUFB10O96000 172 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SDSP20132 328 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 COPB2P35606 906 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CACNB2Q08289 660 aaPredicted RBP11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 GRB14Q14449 540 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 VPS53Q5VIR6 699 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CWC27Q6UX04 472 aaKnown RBP11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NECAB2Q7Z6G3 386 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PRPF38AQ8NAV1 312 aaKnown RBP11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NEDD1Q8NHV4 660 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 TMC2Q8TDI7 906 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CHMP4CQ96CF2 233 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 MMP19Q99542 508 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 GNL3Q9BVP2 549 aaKnown RBP eCLIP11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 FBXO28Q9NVF7 368 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 MTMR7Q9Y216 660 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
CHRFAM7A-204ENST00000562729 EVI5O60447 810 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 STAT3P40763 770 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SLC1A4P43007 532 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 TMEM132BQ14DG7 1078 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SLFN13Q68D06 897 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CPXCR1Q8N123 301 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 ANKLE1Q8NAG6 615 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 PAWRQ96IZ0 340 aaKnown RBP10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 NBPF3Q9H094 633 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 FEM1BQ9UK73 627 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 SYNPO2Q9UMS6 1093 aa10.99□□□□□ -0.65
CHRFAM7A-204ENST00000562729 A0A0G2JMZ2 1700 aa10.98□□□□□ -0.65
CHRFAM7A-204ENST00000562729 ZNF213O14771 459 aa10.98□□□□□ -0.65
CHRFAM7A-204ENST00000562729 FGAP02671 866 aa10.98□□□□□ -0.65
CHRFAM7A-204ENST00000562729 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
CHRFAM7A-204ENST00000562729 BMP3P12645 472 aa10.98□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CCND3P30281 292 aaPredicted RBP10.98□□□□□ -0.65
CHRFAM7A-204ENST00000562729 CYP2C19P33261 490 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms