RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 VPS13AQ96RL7 3174 aa7.97□□□□□ -1.13
TCF4-213ENST00000562543 RLFQ13129 1914 aa7.96□□□□□ -1.13
TCF4-213ENST00000562543 HMGCRP04035 888 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 VGLL4Q14135 290 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 DOC2BQ14184 412 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 HFE2Q6ZVN8 426 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 HERVK_113Q902F9 699 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 COG5Q9UP83 839 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 MAP3K15Q6ZN16 1313 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 KMT2EQ8IZD2 1858 aa7.96□□□□□ -1.14
TCF4-213ENST00000562543 PRRC2BQ5JSZ5 2229 aaKnown RBP7.95□□□□□ -1.14
TCF4-213ENST00000562543 BRWD1Q9NSI6 2320 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 TMEM229AB2RXF0 380 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 ABL2P42684 1182 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 MMP14P50281 582 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 ST3GAL2Q16842 350 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 PPP1R42Q7Z4L9 355 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 ANKRD23Q86SG2 305 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 PLPP7Q8NBV4 271 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 MXD3Q9BW11 206 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 FAM86C1Q9NVL1 165 aa7.95□□□□□ -1.14
TCF4-213ENST00000562543 KCNQ3O43525 872 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 ADH6P28332 368 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 EPHB4P54760 987 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 SNAPC2Q13487 334 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 DACT2Q5SW24 774 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 GJD3Q8N144 294 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 MICALL1Q8N3F8 863 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.94□□□□□ -1.14
TCF4-213ENST00000562543 TRIM11Q96F44 468 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 MFSD14AQ96MC6 490 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 PBX4Q9BYU1 374 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 IQSEC3Q9UPP2 1182 aaPredicted RBP7.94□□□□□ -1.14
TCF4-213ENST00000562543 MYO3BQ8WXR4 1341 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 ARAP2Q8WZ64 1704 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 GBF1Q92538 1859 aa7.94□□□□□ -1.14
TCF4-213ENST00000562543 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 PDHXO00330 501 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 TNPO2O14787 897 aaKnown RBP7.93□□□□□ -1.14
TCF4-213ENST00000562543 RTP1P59025 263 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 PARP10Q53GL7 1025 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 MAP3K21Q5TCX8 1036 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 ASCL5Q7RTU5 278 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 CELF1Q92879 486 aaKnown RBP7.93□□□□□ -1.14
TCF4-213ENST00000562543 ZKSCAN4Q969J2 545 aaPredicted RBP7.93□□□□□ -1.14
TCF4-213ENST00000562543 TESK2Q96S53 571 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 PRRX2Q99811 253 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 PODXL2Q9NZ53 605 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 NAV2Q8IVL1 2488 aa7.93□□□□□ -1.14
TCF4-213ENST00000562543 PLXNB2O15031 1838 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 A6NJY4 79 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 PROB1E7EW31 1015 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 DCXO43602 365 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 PLVAPQ9BX97 442 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 PRR12Q9ULL5 1215 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 CSADQ9Y600 493 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 SNCAIPQ9Y6H5 919 aa7.92□□□□□ -1.14
TCF4-213ENST00000562543 GCN1Q92616 2671 aaKnown RBP7.92□□□□□ -1.14
TCF4-213ENST00000562543 TECTAO75443 2155 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 PRR23AA6NEV1 266 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 UFL1O94874 794 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 HCLS1P14317 486 aaPredicted RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 TXLNAP40222 546 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 TEFQ10587 303 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 PPIL2Q13356 520 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 MTHFSDQ2M296 383 aaKnown RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 TTLL7Q6ZT98 887 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 ERO1BQ86YB8 467 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 FAM178BQ8IXR5 827 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 PARK7Q99497 189 aaKnown RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 UTP14AQ9BVJ6 771 aaKnown RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 SENP6Q9GZR1 1112 aaPredicted RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 ALG13Q9NP73 1137 aaKnown RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 PRDM5Q9NQX1 630 aaPredicted RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 PDLIM7Q9NR12 457 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 NOP53Q9NZM5 478 aaKnown RBP7.91□□□□□ -1.14
TCF4-213ENST00000562543 PCDHGA11Q9Y5H2 935 aa7.91□□□□□ -1.14
TCF4-213ENST00000562543 PIK3R2O00459 728 aa7.9□□□□□ -1.14
TCF4-213ENST00000562543 SNRPA1P09661 255 aaKnown RBP7.9□□□□□ -1.14
TCF4-213ENST00000562543 MOGSQ13724 837 aa7.9□□□□□ -1.14
TCF4-213ENST00000562543 DGLUCYQ7Z3D6 616 aa7.9□□□□□ -1.14
TCF4-213ENST00000562543 PRM3Q9NNZ6 103 aa7.9□□□□□ -1.14
TCF4-213ENST00000562543 KCNH4Q9UQ05 1017 aa7.9□□□□□ -1.14
TCF4-213ENST00000562543 WDR87Q6ZQQ6 2873 aa7.9□□□□□ -1.15
TCF4-213ENST00000562543 ZFYVE26Q68DK2 2539 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 TRIM43BA6NCK2 446 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 GRXCR1A8MXD5 290 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 CYP2C8P10632 490 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 POU3F3P20264 500 aaPredicted RBP7.89□□□□□ -1.15
TCF4-213ENST00000562543 SEMA3FQ13275 785 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 RASA3Q14644 834 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 TBCELQ5QJ74 424 aa7.89□□□□□ -1.15
TCF4-213ENST00000562543 ZNF468Q5VIY5 522 aaPredicted RBP7.89□□□□□ -1.15
TCF4-213ENST00000562543 STRIP1Q5VSL9 837 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms