RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PGK1P00558 417 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 APPP05067 770 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 C1orf53Q5VUE5 145 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 IFNL3Q8IZI9 196 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 ZNF444Q8N0Y2 327 aaPredicted RBP19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 MKL1Q969V6 931 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PRDM5Q9NQX1 630 aaPredicted RBP19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PDLIM7Q9NR12 457 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 MTMR4Q9NYA4 1195 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PHF24Q9UPV7 400 aa19.93■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 DNAJC25-GNG10A0A024R161 153 aa19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 ATP2A1O14983 1001 aa19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SH3RF1Q7Z6J0 888 aa19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 LRRC47Q8N1G4 583 aaKnown RBP19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 STXBP5LQ9Y2K9 1186 aa19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 PLIN4Q96Q06 1357 aa19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 CDH23Q9H251 3354 aa19.92■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 TRIM43BA6NCK2 446 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 AKR1A1P14550 325 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 RNF180Q86T96 592 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 CPXCR1Q8N123 301 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 GMCL1P1Q8NEA9 526 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 BADQ92934 168 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 KIFC2Q96AC6 838 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 TRIM43Q96BQ3 446 aaPredicted RBP19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SLC38A10Q9HBR0 1119 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 ZNF287Q9HBT7 754 aa19.91■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 A0A1W2PQ45 241 aaPredicted RBP19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 A0A1W2PQY0 241 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 ADAMTS4O75173 837 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SNAI1O95863 264 aaPredicted RBP19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 TTLL1O95922 423 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SLC4A3P48751 1232 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 C9orf50Q5SZB4 431 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 MAMDC4Q6UXC1 1216 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 MSL3Q8N5Y2 521 aaKnown RBP19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 FSD1Q9BTV5 496 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 RAVER2Q9HCJ3 691 aaKnown RBP19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SYNPO2Q9UMS6 1093 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 CNPY2Q9Y2B0 182 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 SYNGAP1Q96PV0 1343 aa19.9■□□□□ 0.78
VPS9D1-AS1-201ENST00000562298 ERC2O15083 957 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FOXP2O15409 715 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ZBED4O75132 1171 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TLE2Q04725 743 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 SHHQ15465 462 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ZMYM1Q5SVZ6 1142 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 NEDD1Q8NHV4 660 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 DDX11Q96FC9 970 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FEM1BQ9UK73 627 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 SYNRGQ9UMZ2 1314 aa19.89■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 SALL3Q9BXA9 1300 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TSPY3P0CV98 308 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TSPY8P0CW00 308 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ITGB8P26012 769 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 PDE4BQ07343 736 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 PPARAQ07869 468 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FAM109BQ6ICB4 259 aaPredicted RBP19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FGD4Q96M96 766 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 GUCD1Q96NT3 240 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 NAPBQ9H115 298 aa19.88■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 PRUNE2Q8WUY3 3088 aa19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 MX1P20591 662 aa19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 OAZ1P54368 228 aa19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TFAP4Q01664 338 aa19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 SLFN13Q68D06 897 aa19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ZNF467Q7Z7K2 595 aaPredicted RBP19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ZHX1Q9UKY1 873 aaPredicted RBP19.87■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 DLL1O00548 723 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ADCY6O43306 1168 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CLTBP09497 229 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 BMP3P12645 472 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CCSAPQ6IQ19 270 aaPredicted RBP19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CCDC129Q6ZRS4 1044 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ANKRD35Q8N283 1001 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FAM161BQ96MY7 647 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FAM184BQ9ULE4 1060 aa19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CTDP1Q9Y5B0 961 aaPredicted RBP19.86■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 MYADML2A6NDP7 307 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TMEM232C9JQI7 657 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 PQBP1O60828 265 aaKnown RBP19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ACLYP53396 1101 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 IRX5P78411 483 aaPredicted RBP19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 KLHDC9Q8NEP7 349 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CHST13Q8NET6 341 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TSEN34Q9BSV6 310 aaKnown RBP19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 FBXO40Q9UH90 709 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 TACC3Q9Y6A5 838 aa19.85■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 KIAA0355O15063 1070 aa19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 DUSP11O75319 330 aaKnown RBP19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 SLC3A2P08195 630 aaKnown RBP19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 STAT2P52630 851 aa19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 ACVR2BQ13705 512 aa19.84■□□□□ 0.77
VPS9D1-AS1-201ENST00000562298 CHMP4CQ96CF2 233 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms