RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 STK32AQ8WU08 396 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 RNF34Q969K3 372 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 NACC2Q96BF6 587 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 ZBTB9Q96C00 473 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 NUDT16Q96DE0 195 aaKnown RBP6.33□□□□□ -1.4
CAPN3-211ENST00000562199 FAM81BQ96LP2 452 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 GBP4Q96PP9 640 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 UIMC1Q96RL1 719 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 EPB41L4AQ9HCS5 686 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-211ENST00000562199 RRAGDQ9NQL2 400 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-211ENST00000562199 EXOC1Q9NV70 894 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 SNX5Q9Y5X3 404 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 CARMIL2Q6F5E8 1435 aa6.33□□□□□ -1.4
CAPN3-211ENST00000562199 MADDQ8WXG6 1647 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 DISP3Q9P2K9 1392 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 NINLQ9Y2I6 1382 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 DUOX2Q9NRD8 1548 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 A6NCN8 305 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 PIK3R2O00459 728 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ZBTB7BO15156 539 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 MTRF1O75570 445 aaKnown RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 KRT38O76015 456 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ARIH2O95376 493 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 GLULP15104 373 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 RAC2P15153 192 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ATF3P18847 181 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 CCNCP24863 283 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 RBM6P78332 1123 aaKnown RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 PRPF4BQ13523 1007 aaKnown RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ELOAQ14241 798 aaKnown RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 KRT72Q14CN4 511 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 TEAD4Q15561 434 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 EAPPQ56P03 285 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 IRGCQ6NXR0 463 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 NFATC2IPQ8NCF5 419 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ASB16Q96NS5 453 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 UCN2Q96RP3 112 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 CENPOQ9BU64 300 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 VEZTQ9HBM0 779 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 QPCTLQ9NXS2 382 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 CFAP45Q9UL16 551 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 BLOC1S6Q9UL45 172 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 SUFUQ9UMX1 484 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 CEP131Q9UPN4 1083 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-211ENST00000562199 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 MYOM1P52179 1685 aa6.32□□□□□ -1.4
CAPN3-211ENST00000562199 ZNF521Q96K83 1311 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SPHKAPQ2M3C7 1700 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PLA2R1Q13018 1463 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SERTM1A2A2V5 107 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 F8VZ95 297 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 STXBP3O00186 592 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 AKR1B10O60218 316 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 KINO60870 393 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 KCNA6P17658 529 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 BTF3P20290 206 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PPM1FP49593 454 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 EPHA4P54764 986 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SMC1AQ14683 1233 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PUM3Q15397 648 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 TAF7Q15545 349 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PKN1Q16512 942 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 INF2Q27J81 1249 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PREPLQ4J6C6 727 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ZC3H12BQ5HYM0 836 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ZNF468Q5VIY5 522 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 AP1ARQ63HQ0 302 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 CCDC102BQ68D86 513 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 CYP26C1Q6V0L0 522 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SYT9Q86SS6 491 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ALYREFQ86V81 257 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 CD163Q86VB7 1156 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 KIAA0825Q8IV33 1275 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ANKRD18AQ8IVF6 992 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ANKRD42Q8N9B4 389 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 FRAT1Q92837 279 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 TRIM11Q96F44 468 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SLC26A8Q96RN1 970 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 BAG1Q99933 345 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 SLC39A3Q9BRY0 314 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 MAK16Q9BXY0 300 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 UNC45AQ9H3U1 944 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 DEF6Q9H4E7 631 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 METTL5Q9NRN9 209 aaKnown RBP6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PDRG1Q9NUG6 133 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PPP1R9AQ9ULJ8 1098 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ATP6V0A2Q9Y487 856 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 ZMYM3Q14202 1370 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 NPC1L1Q9UHC9 1359 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 PLEKHH1Q9ULM0 1364 aa6.31□□□□□ -1.4
CAPN3-211ENST00000562199 CDC42BPBQ9Y5S2 1711 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms