RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PCNTO95613 3336 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 SLFN14P0C7P3 912 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 Q8N3U1 123 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 GPBAR1Q8TDU6 330 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 MIR1-1HGQ9H1L0 117 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 PCDHGC5Q9Y5F6 944 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 C4BP0C0L5 1744 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 PKD1L3Q7Z443 1732 aa7.8□□□□□ -1.16
UBR1-203ENST00000562173 SBF1O95248 1867 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 ZNF862O60290 1169 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 PREPP48147 710 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 SOX4Q06945 474 aaPredicted RBP7.79□□□□□ -1.16
UBR1-203ENST00000562173 MAP3K11Q16584 847 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 RASIP1Q5U651 963 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 MEGF10Q96KG7 1140 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 GSX1Q9H4S2 264 aaPredicted RBP7.79□□□□□ -1.16
UBR1-203ENST00000562173 RAD18Q9NS91 495 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 KBTBD4Q9NVX7 518 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 TFCP2L1Q9NZI6 479 aa7.79□□□□□ -1.16
UBR1-203ENST00000562173 IGSF1Q8N6C5 1336 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 GAS2O43903 313 aaKnown RBP7.78□□□□□ -1.16
UBR1-203ENST00000562173 TFE3P19532 575 aaPredicted RBP7.78□□□□□ -1.16
UBR1-203ENST00000562173 GBP2P32456 591 aaPredicted RBP7.78□□□□□ -1.16
UBR1-203ENST00000562173 ERVK-24P63145 666 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 ID3Q02535 119 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 METTL16Q86W50 562 aaKnown RBP7.78□□□□□ -1.16
UBR1-203ENST00000562173 MYRFLQ96LU7 910 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 YIPF2Q9BWQ6 316 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 ATXN3LQ9H3M9 355 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 KIF13BQ9NQT8 1826 aa7.78□□□□□ -1.16
UBR1-203ENST00000562173 CENPJQ9HC77 1338 aaPredicted RBP7.78□□□□□ -1.16
UBR1-203ENST00000562173 TMPRSS2O15393 492 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 SART1O43290 800 aaKnown RBP7.77□□□□□ -1.17
UBR1-203ENST00000562173 ALX3O95076 343 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 IL2RBP14784 551 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 POLD1P28340 1107 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
UBR1-203ENST00000562173 C2CD4AQ8NCU7 369 aaPredicted RBP7.77□□□□□ -1.17
UBR1-203ENST00000562173 GRIN3AQ8TCU5 1115 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 CRIM1Q9NZV1 1036 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 AP4E1Q9UPM8 1137 aa7.77□□□□□ -1.17
UBR1-203ENST00000562173 CCDC7Q96M83 1385 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 H2AFB2P0C5Z0 115 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 LIG1P18858 919 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 CAMK2GQ13555 558 aaPredicted RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 ZC3H12AQ5D1E8 599 aaKnown RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 AKAP4Q5JQC9 854 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 C12orf50Q8NA57 414 aaPredicted RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 UTP4Q969X6 686 aaKnown RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 UBL7Q96S82 380 aaPredicted RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 LRRC3Q9BY71 257 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 ZC3H12CQ9C0D7 883 aaKnown RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 IGSF5Q9NSI5 407 aa7.76□□□□□ -1.17
UBR1-203ENST00000562173 CCNL1Q9UK58 526 aaPredicted RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 SUPT16HQ9Y5B9 1047 aaKnown RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 CICQ96RK0 1608 aaPredicted RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 MYH14Q7Z406 1995 aaKnown RBP7.76□□□□□ -1.17
UBR1-203ENST00000562173 C4AP0C0L4 1744 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 SBNO2Q9Y2G9 1366 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 KCPQ6ZWJ8 1503 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 DHX15O43143 795 aaKnown RBP7.75□□□□□ -1.17
UBR1-203ENST00000562173 PRSS36Q5K4E3 855 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 SNAP47Q5SQN1 464 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 PCDHA4Q9UN74 947 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 TLR6Q9Y2C9 796 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 SNCAIPQ9Y6H5 919 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 PXDNLA1KZ92 1463 aa7.75□□□□□ -1.17
UBR1-203ENST00000562173 KTN1Q86UP2 1357 aaKnown RBP7.74□□□□□ -1.17
UBR1-203ENST00000562173 BPNT1O95861 308 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 EIF4A3P38919 411 aaKnown RBP7.74□□□□□ -1.17
UBR1-203ENST00000562173 SEPT6Q14141 434 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 ZMYM1Q5SVZ6 1142 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 HDXQ7Z353 690 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 NT5DC4Q86YG4 428 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 ZNF654Q8IZM8 581 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 GATAD2BQ8WXI9 593 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 TP53INP1Q96A56 240 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 WDR89Q96FK6 387 aaPredicted RBP7.74□□□□□ -1.17
UBR1-203ENST00000562173 TGIF2Q9GZN2 237 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 DDX41Q9UJV9 622 aaKnown RBP7.74□□□□□ -1.17
UBR1-203ENST00000562173 ACTL7BQ9Y614 415 aa7.74□□□□□ -1.17
UBR1-203ENST00000562173 ARFGEF1Q9Y6D6 1849 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 CILPO75339 1184 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 PF4P02776 101 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 GARTP22102 1010 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 RPL6Q02878 288 aaKnown RBP7.73□□□□□ -1.17
UBR1-203ENST00000562173 MPP2Q14168 576 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 WIPI1Q5MNZ9 446 aaPredicted RBP7.73□□□□□ -1.17
UBR1-203ENST00000562173 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 FAM20CQ8IXL6 584 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 ARMC10Q8N2F6 343 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 PIDD1Q9HB75 910 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 PPP1R9AQ9ULJ8 1098 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 PCDHB5Q9Y5E4 795 aa7.73□□□□□ -1.17
UBR1-203ENST00000562173 CACNA1SQ13698 1873 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms