RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
CDH1-204ENST00000562118 TMEM232C9JQI7 657 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 PEX10O60683 326 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 DDAH1O94760 285 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 RCAN1P53805 252 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 EVCP57679 992 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 GRM4Q14833 912 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 TMEM67Q5HYA8 995 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 CHURC1Q8WUH1 139 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 SPATC1LQ9H0A9 340 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
CDH1-204ENST00000562118 GPHNQ9NQX3 736 aaPredicted RBP15.72■□□□□ 0.11
CDH1-204ENST00000562118 MAD2L2Q9UI95 211 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 LCTP09848 1927 aa15.72■□□□□ 0.11
CDH1-204ENST00000562118 ERICH2A1L162 156 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 RPS6KB1P23443 525 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 PSMA5P28066 241 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 PRMT2P55345 433 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 PKN2Q16513 984 aaKnown RBP15.71■□□□□ 0.11
CDH1-204ENST00000562118 RIOX2Q8IUF8 465 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 USP6NLQ92738 828 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 MTMR8Q96EF0 704 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 JAKMIP1Q96N16 626 aaKnown RBP15.71■□□□□ 0.11
CDH1-204ENST00000562118 PORCNQ9H237 461 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 PRR12Q9ULL5 1215 aa15.71■□□□□ 0.11
CDH1-204ENST00000562118 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 IGHA2P01877 340 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 MAPK4P31152 587 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 PSMC4P43686 418 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 FCGRTP55899 365 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 CCNA1P78396 465 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 SLC35G1Q2M3R5 365 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 COL13A1Q5TAT6 717 aaPredicted RBP15.7■□□□□ 0.1
CDH1-204ENST00000562118 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 ZNF654Q8IZM8 581 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 MOV10L1Q9BXT6 1211 aaKnown RBP15.7■□□□□ 0.1
CDH1-204ENST00000562118 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
CDH1-204ENST00000562118 GJD2Q9UKL4 321 aa15.7■□□□□ 0.1
CDH1-204ENST00000562118 SLC25A27O95847 323 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 SMARCA1P28370 1054 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 COPB2P35606 906 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 RBM25P49756 843 aaKnown RBP15.69■□□□□ 0.1
CDH1-204ENST00000562118 IRF5Q13568 498 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 KIF22Q14807 665 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 ARHGEF6Q15052 776 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 MORN1Q5T089 497 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 SYDE2Q5VT97 1194 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 BLOC1S2Q6QNY1 142 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 RUFY3Q7L099 469 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 ABRAQ8N0Z2 381 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 PAGR1Q9BTK6 254 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 TEX13BQ9BXU2 312 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 EFCC1Q9HA90 598 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 SRRDQ9UH36 339 aa15.69■□□□□ 0.1
CDH1-204ENST00000562118 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
CDH1-204ENST00000562118 RAD21O60216 631 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 PARP1P09874 1014 aaKnown RBP15.68■□□□□ 0.1
CDH1-204ENST00000562118 CASTP20810 708 aaKnown RBP15.68■□□□□ 0.1
CDH1-204ENST00000562118 GRB14Q14449 540 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 APOA5Q6Q788 366 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 GPR142Q7Z601 462 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 STAG2Q8N3U4 1231 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 KIFC2Q96AC6 838 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 KIF2CQ99661 725 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 LRRC2Q9BYS8 371 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 MROH8Q9H579 483 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 RIOX1Q9H6W3 641 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
CDH1-204ENST00000562118 ICAM1P05362 532 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 HOXC6P09630 235 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 CALM1P0DP23 149 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 CALM2P0DP24 149 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 CALM3P0DP25 149 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 CPA1P15085 419 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 STAT3P40763 770 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 TOB2Q14106 344 aaPredicted RBP15.67■□□□□ 0.1
CDH1-204ENST00000562118 FBXO46Q6PJ61 603 aaPredicted RBP15.67■□□□□ 0.1
CDH1-204ENST00000562118 TCEANC2Q96MN5 208 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 SPZ1Q9BXG8 430 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 BRPF3Q9ULD4 1205 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 TRIM17Q9Y577 477 aa15.67■□□□□ 0.1
CDH1-204ENST00000562118 TNPO2O14787 897 aaKnown RBP15.66■□□□□ 0.1
CDH1-204ENST00000562118 CYTH3O43739 400 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 STRNO43815 780 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 ZBED4O75132 1171 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 GOLGA8HP0CJ92 632 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 XRCC5P13010 732 aaKnown RBP15.66■□□□□ 0.1
CDH1-204ENST00000562118 ERCC3P19447 782 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 PTPREP23469 700 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 SLC16A2P36021 539 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 PRKCZQ05513 592 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 TKFCQ3LXA3 575 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 PLEKHH3Q7Z736 793 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 SOCS4Q8WXH5 440 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 MAF1Q9H063 256 aa15.66■□□□□ 0.1
CDH1-204ENST00000562118 JMJD4Q9H9V9 463 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms