RNA–Protein interactions for RNA: ENST00000562011.1

CTU2-203, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-203ENST00000562011 EPHB4P54760 987 aa17.12■□□□□ 0.33
CTU2-203ENST00000562011 SNRNP48Q6IEG0 339 aaKnown RBP17.12■□□□□ 0.33
CTU2-203ENST00000562011 APPBP2Q92624 585 aa17.12■□□□□ 0.33
CTU2-203ENST00000562011 DIS3Q9Y2L1 958 aaKnown RBP17.12■□□□□ 0.33
CTU2-203ENST00000562011 A0A1W2PQ45 241 aaPredicted RBP17.11■□□□□ 0.33
CTU2-203ENST00000562011 A0A1W2PQY0 241 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 GPAA1O43292 621 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 ADAMTS4O75173 837 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 SNAI1O95863 264 aaPredicted RBP17.11■□□□□ 0.33
CTU2-203ENST00000562011 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 CPXCR1Q8N123 301 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
CTU2-203ENST00000562011 DCTPP1Q9H773 170 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 RAVER2Q9HCJ3 691 aaKnown RBP17.11■□□□□ 0.33
CTU2-203ENST00000562011 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
CTU2-203ENST00000562011 MYADML2A6NDP7 307 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 ADCY6O43306 1168 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 GIMAP6Q6P9H5 292 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 RNF180Q86T96 592 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
CTU2-203ENST00000562011 DNAJC25-GNG10A0A024R161 153 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 PQBP1O60828 265 aaKnown RBP17.09■□□□□ 0.33
CTU2-203ENST00000562011 APPP05067 770 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 AKR1A1P14550 325 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 TDO2P48775 406 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 ZNF697Q5TEC3 545 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
CTU2-203ENST00000562011 PRPF38AQ8NAV1 312 aaKnown RBP17.09■□□□□ 0.33
CTU2-203ENST00000562011 OTUD7AQ8TE49 926 aaPredicted RBP17.09■□□□□ 0.33
CTU2-203ENST00000562011 KIFC2Q96AC6 838 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 DDX11Q96FC9 970 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 FGD4Q96M96 766 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
CTU2-203ENST00000562011 CLTBP09497 229 aa17.08■□□□□ 0.32
CTU2-203ENST00000562011 COPB2P35606 906 aa17.08■□□□□ 0.32
CTU2-203ENST00000562011 IFNL3Q8IZI9 196 aa17.08■□□□□ 0.32
CTU2-203ENST00000562011 CDX2Q99626 313 aaPredicted RBP17.08■□□□□ 0.32
CTU2-203ENST00000562011 TTYH1Q9H313 450 aaPredicted RBP17.08■□□□□ 0.32
CTU2-203ENST00000562011 SEMA6BQ9H3T3 888 aa17.08■□□□□ 0.32
CTU2-203ENST00000562011 MTMR4Q9NYA4 1195 aa17.08■□□□□ 0.32
CTU2-203ENST00000562011 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.32
CTU2-203ENST00000562011 TACC3Q9Y6A5 838 aa17.08■□□□□ 0.32
CTU2-203ENST00000562011 ZBED4O75132 1171 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 ACLYP53396 1101 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 FAAP100Q0VG06 881 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 KCNA10Q16322 511 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 CCSAPQ6IQ19 270 aaPredicted RBP17.07■□□□□ 0.32
CTU2-203ENST00000562011 MAMDC4Q6UXC1 1216 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
CTU2-203ENST00000562011 MKL1Q969V6 931 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 FAM184BQ9ULE4 1060 aa17.07■□□□□ 0.32
CTU2-203ENST00000562011 CUL9Q8IWT3 2517 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 SYNGAP1Q96PV0 1343 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
CTU2-203ENST00000562011 ATP2A1O14983 1001 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 KIAA0355O15063 1070 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTU2-203ENST00000562011 KLHDC9Q8NEP7 349 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 GPATCH3Q96I76 525 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
CTU2-203ENST00000562011 HOMER2Q9NSB8 354 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 CDH23Q9H251 3354 aa17.06■□□□□ 0.32
CTU2-203ENST00000562011 ZFYP08048 801 aaPredicted RBP17.05■□□□□ 0.32
CTU2-203ENST00000562011 RAG1P15918 1043 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 GNAT2P19087 354 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 SMAD3P84022 425 aaKnown RBP17.05■□□□□ 0.32
CTU2-203ENST00000562011 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 ACVR2BQ13705 512 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 RASGRP2Q7LDG7 609 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 MYLIPQ8WY64 445 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 TSEN34Q9BSV6 310 aaKnown RBP17.05■□□□□ 0.32
CTU2-203ENST00000562011 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 STARD7Q9NQZ5 370 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.05■□□□□ 0.32
CTU2-203ENST00000562011 FEM1BQ9UK73 627 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 CTDP1Q9Y5B0 961 aaPredicted RBP17.05■□□□□ 0.32
CTU2-203ENST00000562011 PCDHB15Q9Y5E8 787 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 DDX49Q9Y6V7 483 aaKnown RBP17.05■□□□□ 0.32
CTU2-203ENST00000562011 PRUNE2Q8WUY3 3088 aa17.05■□□□□ 0.32
CTU2-203ENST00000562011 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 FOXP2O15409 715 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 TTLL1O95922 423 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 CCDC144BQ3MJ40 725 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 SLFN13Q68D06 897 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 ANKRD35Q8N283 1001 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
CTU2-203ENST00000562011 GMCL1P1Q8NEA9 526 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 NEDD1Q8NHV4 660 aa17.04■□□□□ 0.32
CTU2-203ENST00000562011 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
CTU2-203ENST00000562011 PLIN4Q96Q06 1357 aa17.03■□□□□ 0.32
CTU2-203ENST00000562011 DUSP11O75319 330 aaKnown RBP17.03■□□□□ 0.32
CTU2-203ENST00000562011 C6orf222P0C671 652 aaPredicted RBP17.03■□□□□ 0.32
CTU2-203ENST00000562011 TSPY3P0CV98 308 aa17.03■□□□□ 0.32
CTU2-203ENST00000562011 TSPY8P0CW00 308 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms