RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 RANBP6O60518 1105 aaKnown RBP30.11■■■□□ 2.41
MSLN-203ENST00000561896 ZBED4O75132 1171 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 CYBAP13498 195 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 CYP2C19P33261 490 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 OAZ1P54368 228 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 KCTD2Q14681 263 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 SLC38A10Q9HBR0 1119 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 INCENPQ9NQS7 918 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 STX8Q9UNK0 236 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 TACC3Q9Y6A5 838 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 ALPK3Q96L96 1907 aa30.11■■■□□ 2.41
MSLN-203ENST00000561896 PLA2G6O60733 806 aa30.1■■■□□ 2.41
MSLN-203ENST00000561896 SLC34A2O95436 690 aa30.1■■■□□ 2.41
MSLN-203ENST00000561896 MAML3Q96JK9 1138 aa30.1■■■□□ 2.41
MSLN-203ENST00000561896 C11orf49Q9H6J7 331 aa30.1■■■□□ 2.41
MSLN-203ENST00000561896 DIAPH3Q9NSV4 1193 aa30.1■■■□□ 2.41
MSLN-203ENST00000561896 DDX20Q9UHI6 824 aaKnown RBP30.1■■■□□ 2.41
MSLN-203ENST00000561896 EVI5O60447 810 aa30.09■■■□□ 2.41
MSLN-203ENST00000561896 NT5C2P49902 561 aa30.09■■■□□ 2.41
MSLN-203ENST00000561896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.09■■■□□ 2.41
MSLN-203ENST00000561896 TCP11L1Q9NUJ3 509 aa30.09■■■□□ 2.41
MSLN-203ENST00000561896 SLC1A4P43007 532 aa30.08■■■□□ 2.41
MSLN-203ENST00000561896 STAT2P52630 851 aa30.08■■■□□ 2.41
MSLN-203ENST00000561896 SNRNP48Q6IEG0 339 aaKnown RBP30.08■■■□□ 2.41
MSLN-203ENST00000561896 FAM160B2Q86V87 743 aa30.08■■■□□ 2.41
MSLN-203ENST00000561896 CHURC1Q8WUH1 139 aa30.08■■■□□ 2.41
MSLN-203ENST00000561896 KIFC2Q96AC6 838 aa30.08■■■□□ 2.41
MSLN-203ENST00000561896 NRBP1Q9UHY1 535 aa30.08■■■□□ 2.41
MSLN-203ENST00000561896 CTDP1Q9Y5B0 961 aaPredicted RBP30.08■■■□□ 2.41
MSLN-203ENST00000561896 CWC27Q6UX04 472 aaKnown RBP30.07■■■□□ 2.4
MSLN-203ENST00000561896 TRPV1Q8NER1 839 aa30.07■■■□□ 2.4
MSLN-203ENST00000561896 NMT2O60551 498 aa30.06■■■□□ 2.4
MSLN-203ENST00000561896 COL6A1P12109 1028 aa30.06■■■□□ 2.4
MSLN-203ENST00000561896 ZNF792Q3KQV3 632 aa30.06■■■□□ 2.4
MSLN-203ENST00000561896 HABP4Q5JVS0 413 aaKnown RBP30.06■■■□□ 2.4
MSLN-203ENST00000561896 AKNAD1Q5T1N1 836 aa30.06■■■□□ 2.4
MSLN-203ENST00000561896 STAG1Q8WVM7 1258 aa30.06■■■□□ 2.4
MSLN-203ENST00000561896 RNF41Q9H4P4 317 aaPredicted RBP30.06■■■□□ 2.4
MSLN-203ENST00000561896 LAMA4Q16363 1823 aa30.06■■■□□ 2.4
MSLN-203ENST00000561896 TMEM232C9JQI7 657 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 CNGA1P29973 690 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 RCSD1Q6JBY9 416 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 MFSD6Q6ZSS7 791 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 TOMM22Q9NS69 142 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 FBXO40Q9UH90 709 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 RIPK3Q9Y572 518 aa30.05■■■□□ 2.4
MSLN-203ENST00000561896 TRIOBPQ9H2D6 2365 aa30.04■■■□□ 2.4
MSLN-203ENST00000561896 SEPT4O43236 478 aa30.04■■■□□ 2.4
MSLN-203ENST00000561896 MCCP23508 829 aa30.04■■■□□ 2.4
MSLN-203ENST00000561896 PDE4AP27815 886 aa30.04■■■□□ 2.4
MSLN-203ENST00000561896 CPXCR1Q8N123 301 aa30.04■■■□□ 2.4
MSLN-203ENST00000561896 MSL3Q8N5Y2 521 aaKnown RBP30.04■■■□□ 2.4
MSLN-203ENST00000561896 CHST13Q8NET6 341 aa30.04■■■□□ 2.4
MSLN-203ENST00000561896 PGK2P07205 417 aa30.03■■■□□ 2.4
MSLN-203ENST00000561896 TINF2Q9BSI4 451 aa30.03■■■□□ 2.4
MSLN-203ENST00000561896 DSCC1Q9BVC3 393 aa30.03■■■□□ 2.4
MSLN-203ENST00000561896 COLQQ9Y215 455 aaPredicted RBP30.03■■■□□ 2.4
MSLN-203ENST00000561896 PFASO15067 1338 aa30.02■■■□□ 2.4
MSLN-203ENST00000561896 SMCHD1A6NHR9 2005 aa30.02■■■□□ 2.4
MSLN-203ENST00000561896 TOP1P11387 765 aaKnown RBP30.02■■■□□ 2.4
MSLN-203ENST00000561896 HAND2P61296 217 aa30.02■■■□□ 2.4
MSLN-203ENST00000561896 IRX6P78412 446 aaPredicted RBP30.02■■■□□ 2.4
MSLN-203ENST00000561896 RRP12Q5JTH9 1297 aaKnown RBP30.02■■■□□ 2.4
MSLN-203ENST00000561896 TTC22Q5TAA0 569 aa30.02■■■□□ 2.4
MSLN-203ENST00000561896 DCAF4Q8WV16 495 aa30.02■■■□□ 2.4
MSLN-203ENST00000561896 TTC14Q96N46 770 aa30.02■■■□□ 2.4
MSLN-203ENST00000561896 RAVER2Q9HCJ3 691 aaKnown RBP30.02■■■□□ 2.4
MSLN-203ENST00000561896 RANBP2P49792 3224 aaKnown RBP30.01■■■□□ 2.4
MSLN-203ENST00000561896 DNAJC25-GNG10A0A024R161 153 aa30.01■■■□□ 2.39
MSLN-203ENST00000561896 ZNF213O14771 459 aa30.01■■■□□ 2.39
MSLN-203ENST00000561896 DNM1LO00429 736 aa30■■■□□ 2.39
MSLN-203ENST00000561896 ZNF467Q7Z7K2 595 aaPredicted RBP30■■■□□ 2.39
MSLN-203ENST00000561896 TBC1D10CQ8IV04 446 aa30■■■□□ 2.39
MSLN-203ENST00000561896 ARRDC4Q8NCT1 418 aa30■■■□□ 2.39
MSLN-203ENST00000561896 DDX11Q96FC9 970 aa30■■■□□ 2.39
MSLN-203ENST00000561896 IKQ13123 557 aaPredicted RBP29.99■■■□□ 2.39
MSLN-203ENST00000561896 ESR2Q92731 530 aa29.99■■■□□ 2.39
MSLN-203ENST00000561896 TMEM47Q9BQJ4 181 aa29.99■■■□□ 2.39
MSLN-203ENST00000561896 CTNNA3Q9UI47 895 aa29.99■■■□□ 2.39
MSLN-203ENST00000561896 ISY1Q9ULR0 285 aaKnown RBP29.99■■■□□ 2.39
MSLN-203ENST00000561896 GSPT1P15170 499 aaKnown RBP29.98■■■□□ 2.39
MSLN-203ENST00000561896 TKFCQ3LXA3 575 aa29.98■■■□□ 2.39
MSLN-203ENST00000561896 MAMDC4Q6UXC1 1216 aa29.98■■■□□ 2.39
MSLN-203ENST00000561896 KCTD1Q719H9 257 aa29.98■■■□□ 2.39
MSLN-203ENST00000561896 SYNGAP1Q96PV0 1343 aa29.97■■■□□ 2.39
MSLN-203ENST00000561896 BTNL9Q6UXG8 535 aa29.97■■■□□ 2.39
MSLN-203ENST00000561896 CHRDL2Q6WN34 429 aa29.97■■■□□ 2.39
MSLN-203ENST00000561896 PRO3102Q9H379 93 aa29.97■■■□□ 2.39
MSLN-203ENST00000561896 PRR12Q9ULL5 1215 aa29.97■■■□□ 2.39
MSLN-203ENST00000561896 DNAH12Q6ZR08 3092 aa29.97■■■□□ 2.39
MSLN-203ENST00000561896 ZNF536O15090 1300 aa29.96■■■□□ 2.39
MSLN-203ENST00000561896 RAD50Q92878 1312 aa29.96■■■□□ 2.39
MSLN-203ENST00000561896 CCDC178Q5BJE1 867 aa29.96■■■□□ 2.39
MSLN-203ENST00000561896 PRAMEF19Q5SWL8 479 aa29.96■■■□□ 2.39
MSLN-203ENST00000561896 ANKRD35Q8N283 1001 aa29.96■■■□□ 2.39
MSLN-203ENST00000561896 ACAD9Q9H845 621 aa29.96■■■□□ 2.39
MSLN-203ENST00000561896 SLC4A3P48751 1232 aa29.95■■■□□ 2.39
MSLN-203ENST00000561896 IMMTQ16891 758 aaKnown RBP29.95■■■□□ 2.39
MSLN-203ENST00000561896 DGKHQ86XP1 1220 aa29.95■■■□□ 2.39
MSLN-203ENST00000561896 CNPY2Q9Y2B0 182 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms