RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 MAML3Q96JK9 1138 aa12.22□□□□□ -0.45
CLK3-205ENST00000561673 MMP19Q99542 508 aa12.22□□□□□ -0.45
CLK3-205ENST00000561673 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
CLK3-205ENST00000561673 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
CLK3-205ENST00000561673 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
CLK3-205ENST00000561673 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLK3-205ENST00000561673 SUPT16HQ9Y5B9 1047 aaKnown RBP12.22□□□□□ -0.45
CLK3-205ENST00000561673 NMT2O60551 498 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 MSCO60682 206 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 FGAP02671 866 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 HSPD1P10809 573 aaKnown RBP12.21□□□□□ -0.45
CLK3-205ENST00000561673 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.45
CLK3-205ENST00000561673 PRAMEF19Q5SWL8 479 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 ZNF589Q86UQ0 364 aaPredicted RBP12.21□□□□□ -0.45
CLK3-205ENST00000561673 C7orf61Q8IZ16 206 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 TEX13BQ9BXU2 312 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 SLC38A10Q9HBR0 1119 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 IL17RBQ9NRM6 502 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 FEM1BQ9UK73 627 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 RIPK3Q9Y572 518 aa12.21□□□□□ -0.45
CLK3-205ENST00000561673 TSPY2A6NKD2 308 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 ATP2A1O14983 1001 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
CLK3-205ENST00000561673 ZBED4O75132 1171 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 FGRP09769 529 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 BMP3P12645 472 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 SDSP20132 328 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 COPB2P35606 906 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 KCTD2Q14681 263 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 ZNF792Q3KQV3 632 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 SNRNP48Q6IEG0 339 aaKnown RBP12.2□□□□□ -0.46
CLK3-205ENST00000561673 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 CHMP4CQ96CF2 233 aa12.2□□□□□ -0.46
CLK3-205ENST00000561673 ZNF236Q9UL36 1845 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 TMEM232C9JQI7 657 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 SEPT4O43236 478 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 ORC4O43929 436 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 MCCP23508 829 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 TINF2Q9BSI4 451 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 SENP6Q9GZR1 1112 aaPredicted RBP12.19□□□□□ -0.46
CLK3-205ENST00000561673 RAVER2Q9HCJ3 691 aaKnown RBP12.19□□□□□ -0.46
CLK3-205ENST00000561673 ZMYND8Q9ULU4 1186 aaPredicted RBP12.19□□□□□ -0.46
CLK3-205ENST00000561673 STX8Q9UNK0 236 aa12.19□□□□□ -0.46
CLK3-205ENST00000561673 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
CLK3-205ENST00000561673 CTDP1Q9Y5B0 961 aaPredicted RBP12.19□□□□□ -0.46
CLK3-205ENST00000561673 PARP14Q460N5 1801 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 CCDC171Q6TFL3 1326 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 DNM1LO00429 736 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 SYN1P17600 705 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 SLC1A4P43007 532 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 NOVP48745 357 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 GJC2Q5T442 439 aaPredicted RBP12.18□□□□□ -0.46
CLK3-205ENST00000561673 IFNLR1Q8IU57 520 aaPredicted RBP12.18□□□□□ -0.46
CLK3-205ENST00000561673 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
CLK3-205ENST00000561673 LAMA2P24043 3122 aaKnown RBP12.18□□□□□ -0.46
CLK3-205ENST00000561673 COL11A1P12107 1806 aaPredicted RBP12.17□□□□□ -0.46
CLK3-205ENST00000561673 DNAJC25-GNG10A0A024R161 153 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
CLK3-205ENST00000561673 STAT2P52630 851 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 OAZ1P54368 228 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 HAND2P61296 217 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 RRP12Q5JTH9 1297 aaKnown RBP12.17□□□□□ -0.46
CLK3-205ENST00000561673 RCSD1Q6JBY9 416 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 CWC27Q6UX04 472 aaKnown RBP12.17□□□□□ -0.46
CLK3-205ENST00000561673 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 CHURC1Q8WUH1 139 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 DDX11Q96FC9 970 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 NRBP1Q9UHY1 535 aa12.17□□□□□ -0.46
CLK3-205ENST00000561673 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
CLK3-205ENST00000561673 ZMYM6O95789 1325 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 PLA2G6O60733 806 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 ZNF865P0CJ78 1059 aaPredicted RBP12.16□□□□□ -0.46
CLK3-205ENST00000561673 FDX1P10109 184 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
CLK3-205ENST00000561673 MFAP1P55081 439 aaKnown RBP12.16□□□□□ -0.46
CLK3-205ENST00000561673 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
CLK3-205ENST00000561673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLK3-205ENST00000561673 RASGRP2Q7LDG7 609 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 FAM160B2Q86V87 743 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 ANKRD35Q8N283 1001 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 CHST13Q8NET6 341 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 AGBL1Q96MI9 1066 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 GDF15Q99988 308 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 TCP11L1Q9NUJ3 509 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 MTMR7Q9Y216 660 aa12.16□□□□□ -0.46
CLK3-205ENST00000561673 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
CLK3-205ENST00000561673 ZNF536O15090 1300 aa12.15□□□□□ -0.46
CLK3-205ENST00000561673 ABCB7O75027 752 aa12.15□□□□□ -0.46
CLK3-205ENST00000561673 SNAI1O95863 264 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms