RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CCL14Q16627 93 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 NPLOC4Q8TAT6 608 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 TRIB2Q92519 343 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 CNNM2Q9H8M5 875 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
TPM1-230ENST00000561266 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 FLRT1Q9NZU1 646 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 ZNF536O15090 1300 aa16.35■□□□□ 0.21
TPM1-230ENST00000561266 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
TPM1-230ENST00000561266 ZNF236Q9UL36 1845 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 PLXNA1Q9UIW2 1896 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 STAT3P40763 770 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 CCNA1P78396 465 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 IQCA1Q86XH1 822 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 CPXCR1Q8N123 301 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 SHCBP1Q8NEM2 672 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 DCAF4Q8WV16 495 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
TPM1-230ENST00000561266 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
TPM1-230ENST00000561266 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
TPM1-230ENST00000561266 PLA2G6O60733 806 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 COBLO75128 1261 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 STAT2P52630 851 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 ZNF543Q08ER8 600 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 GRB14Q14449 540 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 ADCK5Q3MIX3 580 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 PNMA1Q8ND90 353 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 NCOA7Q8NI08 942 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 NUDT12Q9BQG2 462 aa16.33■□□□□ 0.2
TPM1-230ENST00000561266 SLC15A5A6NIM6 579 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 INHAP05111 366 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 MAP2K5Q13163 448 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 SLC35G1Q2M3R5 365 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
TPM1-230ENST00000561266 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 STAG2Q8N3U4 1231 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 UNC93B1Q9H1C4 597 aa16.32■□□□□ 0.2
TPM1-230ENST00000561266 LCTP09848 1927 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
TPM1-230ENST00000561266 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 ZBED4O75132 1171 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 IGHA2P01877 340 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 ADORA2AP29274 412 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 TRDNQ13061 729 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
TPM1-230ENST00000561266 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
TPM1-230ENST00000561266 KCNB2Q92953 911 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 UBAC1Q9BSL1 405 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 KAT14Q9H8E8 782 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 MYH6P13533 1939 aa16.31■□□□□ 0.2
TPM1-230ENST00000561266 MCM3APO60318 1980 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 PGK2P07205 417 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
TPM1-230ENST00000561266 CCL5P13501 91 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 EN2P19622 333 aaPredicted RBP16.3■□□□□ 0.2
TPM1-230ENST00000561266 RGS2P41220 211 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 NT5C2P49902 561 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 CCDC178Q5BJE1 867 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
TPM1-230ENST00000561266 SYDE2Q5VT97 1194 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 RALYLQ86SE5 291 aaKnown RBP16.3■□□□□ 0.2
TPM1-230ENST00000561266 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 MROH8Q9H579 483 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
TPM1-230ENST00000561266 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
TPM1-230ENST00000561266 MKI67P46013 3256 aaKnown RBP16.29■□□□□ 0.2
TPM1-230ENST00000561266 PRC1O43663 620 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 SLC25A27O95847 323 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 HOXC6P09630 235 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 CPA1P15085 419 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 TSGA10IPQ3SY00 556 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 APBA2Q99767 749 aa16.29■□□□□ 0.2
TPM1-230ENST00000561266 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
TPM1-230ENST00000561266 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
TPM1-230ENST00000561266 STRNO43815 780 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 HSPA4P34932 840 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 RGS19P49795 217 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 CACNB2Q08289 660 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms