RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ZNFX1Q9P2E3 1918 aaKnown RBP15.01□□□□□ -0.01
CHRNA3-208ENST00000561128 ZNF536O15090 1300 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 H0YGN5 161 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
CHRNA3-208ENST00000561128 MCCP23508 829 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 PRAMEF19Q5SWL8 479 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 ANO1Q5XXA6 986 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 SNRNP48Q6IEG0 339 aaKnown RBP15□□□□□ -0.01
CHRNA3-208ENST00000561128 TTBK2Q6IQ55 1244 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 CPXCR1Q8N123 301 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 STAG1Q8WVM7 1258 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 TOMM22Q9NS69 142 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 OGDHLQ9ULD0 1010 aa15□□□□□ -0.01
CHRNA3-208ENST00000561128 TMEM232C9JQI7 657 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 BMP3P12645 472 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 STAT3P40763 770 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 PTH1RQ03431 593 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 AKNAD1Q5T1N1 836 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 TICAM2Q86XR7 235 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 LENG1Q96BZ8 264 aaPredicted RBP14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 GMCL1Q96IK5 515 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 MAML3Q96JK9 1138 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 MMP19Q99542 508 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 MROH8Q9H579 483 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 SLC38A10Q9HBR0 1119 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 SYNPO2Q9UMS6 1093 aa14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
CHRNA3-208ENST00000561128 FRMPD2Q68DX3 1309 aaPredicted RBP14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 CHMLP26374 656 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 SLC4A3P48751 1232 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 ZNF792Q3KQV3 632 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 OLFML2BQ68BL8 750 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 DPP9Q86TI2 863 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 TRMT44Q8IYL2 757 aaKnown RBP14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 PRPF38AQ8NAV1 312 aaKnown RBP14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 TMEM47Q9BQJ4 181 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 TEX13BQ9BXU2 312 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 FEM1BQ9UK73 627 aa14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 ISY1Q9ULR0 285 aaKnown RBP14.98□□□□□ -0.01
CHRNA3-208ENST00000561128 SMCHD1A6NHR9 2005 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 DNAJC25-GNG10A0A024R161 153 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 B4E1Z4 1266 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 SLC25A27O95847 323 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 FCER1AP12319 257 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 SLC16A2P36021 539 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 SLC1A4P43007 532 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 COL9A3Q14050 684 aaPredicted RBP14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 MFSD14CQ5VZR4 134 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 ABRAQ8N0Z2 381 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 AGBL1Q96MI9 1066 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 HOMER2Q9NSB8 354 aa14.97□□□□□ -0.01
CHRNA3-208ENST00000561128 ASTN1O14525 1302 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 STRNO43815 780 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 COL6A1P12109 1028 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 STAT2P52630 851 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 CCDC96Q2M329 555 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 CPVLQ9H3G5 476 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 DDX20Q9UHI6 824 aaKnown RBP14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 MCM3APO60318 1980 aa14.96□□□□□ -0.01
CHRNA3-208ENST00000561128 KDM4AO75164 1064 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 PDHBP11177 359 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 CNGA1P29973 690 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 MUM1L1Q5H9M0 696 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 DPF3Q92784 378 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 GPCPD1Q9NPB8 672 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 TCP11L1Q9NUJ3 509 aa14.95□□□□□ -0.02
CHRNA3-208ENST00000561128 HIP1O00291 1037 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 ADCY6O43306 1168 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 TOP1P11387 765 aaKnown RBP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 PTGS1P23219 599 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 MFAP1P55081 439 aaKnown RBP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 CNTN2Q02246 1040 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 IKQ13123 557 aaPredicted RBP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 KCTD2Q14681 263 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 STOX1Q6ZVD7 989 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 CYB5R4Q7L1T6 521 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 PURBQ96QR8 312 aaKnown RBP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 C11orf49Q9H6J7 331 aa14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 COLQQ9Y215 455 aaPredicted RBP14.94□□□□□ -0.02
CHRNA3-208ENST00000561128 RAD50Q92878 1312 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 ZNF213O14771 459 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 SGSM2O43147 1006 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 ZBED4O75132 1171 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 ZNF865P0CJ78 1059 aaPredicted RBP14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 SNHG28P0DPA3 235 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 LRRC26Q2I0M4 334 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 NECAB2Q7Z6G3 386 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 FAM160B2Q86V87 743 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 C7orf61Q8IZ16 206 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 ENAHQ8N8S7 591 aaPredicted RBP14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 ANKLE1Q8NAG6 615 aa14.93□□□□□ -0.02
CHRNA3-208ENST00000561128 DCAF4Q8WV16 495 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms