RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DDAH1O94760 285 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 CTGFP29279 349 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 EVCP57679 992 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 CCNA1P78396 465 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 KIF22Q14807 665 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 RUFY3Q7L099 469 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 SHCBP1Q8NEM2 672 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 ALDH8A1Q9H2A2 487 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 ZNF214Q9UL59 606 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-221ENST00000561055 LCTP09848 1927 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 PARP1P09874 1014 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CALM1P0DP23 149 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CALM2P0DP24 149 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CALM3P0DP25 149 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 MAPK4P31152 587 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 PSMC4P43686 418 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 RCAN1P53805 252 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 PRMT2P55345 433 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 GRM4Q14833 912 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 TMEM132BQ14DG7 1078 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 PKN2Q16513 984 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 RASGRP2Q7LDG7 609 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CTU1Q7Z7A3 348 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CATIPQ7Z7H3 387 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 TRIM47Q96LD4 638 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 MAD2L2Q9UI95 211 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 PRR12Q9ULL5 1215 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 MCM3APO60318 1980 aa11.25□□□□□ -0.61
RABGGTA-221ENST00000561055 CCDC69A6NI79 296 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 PEX10O60683 326 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 ZBED4O75132 1171 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 SLC25A27O95847 323 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 CPA1P15085 419 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 HOXD10P28358 340 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 COPB2P35606 906 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 FCGRTP55899 365 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 CCDC96Q2M329 555 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 OTOP1Q7RTM1 612 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 PAGR1Q9BTK6 254 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 MOV10L1Q9BXT6 1211 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 LRRC2Q9BYS8 371 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 PORCNQ9H237 461 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 RANBP17Q9H2T7 1088 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 GJD2Q9UKL4 321 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 ZNF536O15090 1300 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 FRMPD2Q68DX3 1309 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 NID2Q14112 1375 aa11.24□□□□□ -0.61
RABGGTA-221ENST00000561055 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 STRNO43815 780 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 SLC16A2P36021 539 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 STAT3P40763 770 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 PPP2R5BQ15173 497 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 Q6ZUG5 572 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 ABRAQ8N0Z2 381 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 TCEANC2Q96MN5 208 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 MAF1Q9H063 256 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 MROH8Q9H579 483 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 SRRDQ9UH36 339 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 SLC12A7Q9Y666 1083 aa11.23□□□□□ -0.61
RABGGTA-221ENST00000561055 TNPO2O14787 897 aaKnown RBP11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 ICAM1P05362 532 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 PTPREP23469 700 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 KIF5BP33176 963 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 GNAQP50148 359 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 IKQ13123 557 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 IRF5Q13568 498 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 TOB2Q14106 344 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 TKFCQ3LXA3 575 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 MORN1Q5T089 497 aa11.22□□□□□ -0.61
RABGGTA-221ENST00000561055 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms