RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LRRC4BQ9NT99 713 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 ANKIB1Q9P2G1 1089 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
RABGGTA-220ENST00000560998 UBR3Q6ZT12 1888 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 CALM1P0DP23 149 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 CALM2P0DP24 149 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 CALM3P0DP25 149 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 CYP2D6P10635 497 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 ADRA2BP18089 450 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 E2F4Q16254 413 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 PKN1Q16512 942 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 MAP9Q49MG5 647 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 RILPL1Q5EBL4 403 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 DZIP1Q86YF9 867 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 CEP120Q8N960 986 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 TC2NQ8N9U0 490 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 SHISA4Q96DD7 197 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 ARPP21Q9UBL0 812 aaPredicted RBP15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 AFF2P51816 1311 aa15.72■□□□□ 0.11
RABGGTA-220ENST00000560998 PRPF3O43395 683 aaKnown RBP15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 RNF40O75150 1001 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 DDAH1O94760 285 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 SETQ01105 290 aaPredicted RBP15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 AKAP17AQ02040 695 aaKnown RBP15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 TROAPQ12815 778 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 NR5A1Q13285 461 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 OXER1Q8TDS5 423 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 PANX2Q96RD6 677 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 XDHP47989 1333 aa15.71■□□□□ 0.11
RABGGTA-220ENST00000560998 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.1
RABGGTA-220ENST00000560998 SEPT12Q8IYM1 358 aa15.71■□□□□ 0.1
RABGGTA-220ENST00000560998 WDR66Q8TBY9 1149 aa15.71■□□□□ 0.1
RABGGTA-220ENST00000560998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 CTAGE15A4D2H0 777 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 CTAGE9A4FU28 777 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 TMEM232C9JQI7 657 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 PRPF6O94906 941 aaKnown RBP15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 CTAGE8P0CG41 777 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 C15orf52Q6ZUT6 534 aaKnown RBP15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 TMTC3Q6ZXV5 915 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 CTAGE6Q86UF2 777 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 CTAGE4Q8IX94 777 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 INTS13Q9NVM9 706 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 FBXO2Q9UK22 296 aaPredicted RBP15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 KCNH3Q9ULD8 1083 aa15.7■□□□□ 0.1
RABGGTA-220ENST00000560998 LDHBP07195 334 aaKnown RBP15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 PTPREP23469 700 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 MNAT1P51948 309 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 VSNL1P62760 191 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 ELOA2Q8IYF1 753 aaPredicted RBP15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 CNPY4Q8N129 248 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 MYO1AQ9UBC5 1043 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 SUFUQ9UMX1 484 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 EBAG9O00559 213 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 NMT2O60551 498 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 XBP1P17861 261 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 PDE4BQ07343 736 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 FAM47AQ5JRC9 791 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 VPS54Q9P1Q0 977 aa15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 V9GY48 417 aaPredicted RBP15.69■□□□□ 0.1
RABGGTA-220ENST00000560998 HNRNPH1P31943 449 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 SATB1Q01826 763 aa15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 KARSQ15046 597 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 LONRF3Q496Y0 759 aa15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 ZNF804AQ7Z570 1209 aa15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 METTL16Q86W50 562 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 PDILTQ8N807 584 aa15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 RPGRQ92834 1020 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 MRPL44Q9H9J2 332 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 MCM9Q9NXL9 1143 aa15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
RABGGTA-220ENST00000560998 hCG_1642624A0A1W2PR95 340 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 A6NNZ2 444 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 LRRIQ3A6PVS8 624 aaPredicted RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 C21orf2O43822 256 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 USP17L8P0C7I0 530 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GYS1P13807 737 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 KRT2P35908 639 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GSTO1P78417 241 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GPSM2P81274 684 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GRIN1Q05586 938 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GOLGA8FQ08AF8 430 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GOLGA8DPQ0D2H9 430 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 PNOCQ13519 176 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 TUBB8Q3ZCM7 444 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GBP6Q6ZN66 633 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GPR101Q96P66 508 aaPredicted RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 ZSWIM4Q9H7M6 989 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms