RNA–Protein interactions for RNA: ENST00000560808.1

NEO1-211, Transcript of neogenin 1, humanhuman

TSL 3

Gene NEO1, Length 1,046 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-211ENST00000560808 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
NEO1-211ENST00000560808 COL6A3P12111 3177 aa11.42□□□□□ -0.58
NEO1-211ENST00000560808 GPAA1O43292 621 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 PQBP1O60828 265 aaKnown RBP11.41□□□□□ -0.58
NEO1-211ENST00000560808 SNAI1O95863 264 aaPredicted RBP11.41□□□□□ -0.58
NEO1-211ENST00000560808 AKR1A1P14550 325 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 LRRFIP1Q32MZ4 808 aaKnown RBP11.41□□□□□ -0.58
NEO1-211ENST00000560808 ZNF697Q5TEC3 545 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 MSL3Q8N5Y2 521 aaKnown RBP11.41□□□□□ -0.58
NEO1-211ENST00000560808 MKL1Q969V6 931 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 GUCD1Q96NT3 240 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
NEO1-211ENST00000560808 SEMA6BQ9H3T3 888 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
NEO1-211ENST00000560808 MTMR4Q9NYA4 1195 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
NEO1-211ENST00000560808 DNAH12Q6ZR08 3092 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 DNAJC25-GNG10A0A024R161 153 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 A0A1W2PQ45 241 aaPredicted RBP11.4□□□□□ -0.58
NEO1-211ENST00000560808 A0A1W2PQY0 241 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 M0R2C6 588 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 ATP2A1O14983 1001 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 TTLL1O95922 423 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 CLTBP09497 229 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 ITGB8P26012 769 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 ACLYP53396 1101 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 KCNA10Q16322 511 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 IFNL3Q8IZI9 196 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 NUP133Q8WUM0 1156 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 LENG1Q96BZ8 264 aaPredicted RBP11.4□□□□□ -0.58
NEO1-211ENST00000560808 CEP95Q96GE4 821 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 NACAP1Q9BZK3 213 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
NEO1-211ENST00000560808 TMEM39AQ9NV64 488 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 FEM1BQ9UK73 627 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 ALPK3Q96L96 1907 aa11.4□□□□□ -0.58
NEO1-211ENST00000560808 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 KIAA0355O15063 1070 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 SLC3A2P08195 630 aaKnown RBP11.39□□□□□ -0.59
NEO1-211ENST00000560808 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 RAG1P15918 1043 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 TFAP4Q01664 338 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 PDE4BQ07343 736 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 ACVR2BQ13705 512 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 LRRC47Q8N1G4 583 aaKnown RBP11.39□□□□□ -0.59
NEO1-211ENST00000560808 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 SEC62Q99442 399 aaKnown RBP11.39□□□□□ -0.59
NEO1-211ENST00000560808 CDX2Q99626 313 aaPredicted RBP11.39□□□□□ -0.59
NEO1-211ENST00000560808 SLC38A10Q9HBR0 1119 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 STARD7Q9NQZ5 370 aa11.39□□□□□ -0.59
NEO1-211ENST00000560808 ZHX1Q9UKY1 873 aaPredicted RBP11.39□□□□□ -0.59
NEO1-211ENST00000560808 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
NEO1-211ENST00000560808 TMEM232C9JQI7 657 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 ERC2O15083 957 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 DUSP11O75319 330 aaKnown RBP11.38□□□□□ -0.59
NEO1-211ENST00000560808 BMP3P12645 472 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 EPHB4P54760 987 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 SMAD3P84022 425 aaKnown RBP11.38□□□□□ -0.59
NEO1-211ENST00000560808 FAAP100Q0VG06 881 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
NEO1-211ENST00000560808 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 KLHDC9Q8NEP7 349 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 CHST13Q8NET6 341 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 CHMP4CQ96CF2 233 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 SYNPO2Q9UMS6 1093 aa11.38□□□□□ -0.59
NEO1-211ENST00000560808 SYNRGQ9UMZ2 1314 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 MOXD2PA6NHM9 499 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 C6orf222P0C671 652 aaPredicted RBP11.37□□□□□ -0.59
NEO1-211ENST00000560808 OAZ1P54368 228 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 FPGSQ05932 587 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 GNASQ5JWF2 1037 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 CCSAPQ6IQ19 270 aaPredicted RBP11.37□□□□□ -0.59
NEO1-211ENST00000560808 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.37□□□□□ -0.59
NEO1-211ENST00000560808 OTUD7AQ8TE49 926 aaPredicted RBP11.37□□□□□ -0.59
NEO1-211ENST00000560808 CHURC1Q8WUH1 139 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 RNPC3Q96LT9 517 aaKnown RBP11.37□□□□□ -0.59
NEO1-211ENST00000560808 GLT1D1Q96MS3 346 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 FSD1Q9BTV5 496 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 NAPBQ9H115 298 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 ABHD16BQ9H3Z7 469 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 SPC25Q9HBM1 224 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 HOMER2Q9NSB8 354 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
NEO1-211ENST00000560808 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
NEO1-211ENST00000560808 TTC41PQ6P2S7 1318 aa11.36□□□□□ -0.59
NEO1-211ENST00000560808 MYADML2A6NDP7 307 aa11.36□□□□□ -0.59
NEO1-211ENST00000560808 TIMP1P01033 207 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms