RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 LRRC41Q15345 812 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 SNRNP48Q6IEG0 339 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 LENG1Q96BZ8 264 aaPredicted RBP12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 FGD4Q96M96 766 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 SLC5A4Q9NY91 659 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 DIS3Q9Y2L1 958 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
SNRPA1-212ENST00000560496 VCANP13611 3396 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 DNAJC25-GNG10A0A024R161 153 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 KBTBD13C9JR72 458 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 ATP2A1O14983 1001 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 ZNF865P0CJ78 1059 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 PPARAQ07869 468 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 KCTD2Q14681 263 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 NEDD1Q8NHV4 660 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 MKL1Q969V6 931 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 TINF2Q9BSI4 451 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 NAPBQ9H115 298 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 SLC38A10Q9HBR0 1119 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 A0A0C4DFX4 3053 aa12.1□□□□□ -0.47
SNRPA1-212ENST00000560496 ADAMTS4O75173 837 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 TTLL1O95922 423 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 APPP05067 770 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 TRIM60Q495X7 471 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 VPS53Q5VIR6 699 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 SLC39A5Q6ZMH5 540 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 XPNPEP3Q9NQH7 507 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 ATP11BQ9Y2G3 1177 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 SYNRGQ9UMZ2 1314 aa12.09□□□□□ -0.47
SNRPA1-212ENST00000560496 SPTBN5Q9NRC6 3674 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 ADCY6O43306 1168 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 TSPY3P0CV98 308 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 TSPY8P0CW00 308 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 AKR1A1P14550 325 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 C1orf53Q5VUE5 145 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 Q7L0L9 218 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 ZNF444Q8N0Y2 327 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 NACAP1Q9BZK3 213 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 RAVER2Q9HCJ3 691 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
SNRPA1-212ENST00000560496 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 PGK1P00558 417 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 RARBP10826 455 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 ADCYAP1R1P41586 468 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 NOVP48745 357 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 PDE1AP54750 535 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 TFAP4Q01664 338 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 CTDSPL2Q05D32 466 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 PDE4BQ07343 736 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 MAMDC4Q6UXC1 1216 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 CPXCR1Q8N123 301 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 ZNF536O15090 1300 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 ZMYM6O95789 1325 aa12.07□□□□□ -0.48
SNRPA1-212ENST00000560496 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 NMT2O60551 498 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 BMP3P12645 472 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 STAT2P52630 851 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 OAZ1P54368 228 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 DEFB123Q8N688 67 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 FERMT2Q96AC1 680 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 FAM227BQ96M60 508 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 KATNBL1Q9H079 304 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 INCENPQ9NQS7 918 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 IL17RBQ9NRM6 502 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 ASTN1O14525 1302 aa12.06□□□□□ -0.48
SNRPA1-212ENST00000560496 TRIM43BA6NCK2 446 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 MYADML2A6NDP7 307 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 ZBED4O75132 1171 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms