RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PTPREP23469 700 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 RGS2P41220 211 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 TFAP4Q01664 338 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 KLRC3Q07444 240 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 MAP2K5Q13163 448 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 PLS1Q14651 629 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.47■□□□□ 0.39
IDH3A-219ENST00000560414 PAK6Q9NQU5 681 aaPredicted RBP17.47■□□□□ 0.39
IDH3A-219ENST00000560414 MTMR4Q9NYA4 1195 aa17.47■□□□□ 0.39
IDH3A-219ENST00000560414 SLC15A5A6NIM6 579 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 NDUFB10O96000 172 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 FGAP02671 866 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
IDH3A-219ENST00000560414 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
IDH3A-219ENST00000560414 ERCC3P19447 782 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 ALX1Q15699 326 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 PRPF38BQ5VTL8 546 aaKnown RBP17.46■□□□□ 0.39
IDH3A-219ENST00000560414 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
IDH3A-219ENST00000560414 MB21D1Q8N884 522 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 APBA2Q99767 749 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
IDH3A-219ENST00000560414 IVNS1ABPQ9Y6Y0 642 aa17.46■□□□□ 0.39
IDH3A-219ENST00000560414 RPTORQ8N122 1335 aa17.46■□□□□ 0.38
IDH3A-219ENST00000560414 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
IDH3A-219ENST00000560414 CAMK2BQ13554 666 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 GRB14Q14449 540 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 TMEM132BQ14DG7 1078 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 TICAM2Q86XR7 235 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 MKL1Q969V6 931 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 HMX1Q9NP08 348 aaPredicted RBP17.45■□□□□ 0.38
IDH3A-219ENST00000560414 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.45■□□□□ 0.38
IDH3A-219ENST00000560414 FLRT1Q9NZU1 646 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
IDH3A-219ENST00000560414 VWA5AO00534 786 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 TTLL1O95922 423 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 CACNB2Q08289 660 aaPredicted RBP17.44■□□□□ 0.38
IDH3A-219ENST00000560414 MAP3K21Q5TCX8 1036 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 NPLOC4Q8TAT6 608 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 ANAPC4Q9UJX5 808 aa17.44■□□□□ 0.38
IDH3A-219ENST00000560414 PLIN4Q96Q06 1357 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 TSPY2A6NKD2 308 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 RANBP6O60518 1105 aaKnown RBP17.43■□□□□ 0.38
IDH3A-219ENST00000560414 NMT2O60551 498 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 FARP2O94887 1054 aaPredicted RBP17.43■□□□□ 0.38
IDH3A-219ENST00000560414 HAND2P61296 217 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 CWC27Q6UX04 472 aaKnown RBP17.43■□□□□ 0.38
IDH3A-219ENST00000560414 PLPP6Q8IY26 295 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 TRMT44Q8IYL2 757 aaKnown RBP17.43■□□□□ 0.38
IDH3A-219ENST00000560414 SHCBP1Q8NEM2 672 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 A0A0G2JMZ2 1700 aa17.43■□□□□ 0.38
IDH3A-219ENST00000560414 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 ADORA2AP29274 412 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
IDH3A-219ENST00000560414 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
IDH3A-219ENST00000560414 DPP9Q86TI2 863 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 REPS2Q8NFH8 660 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 SLF1Q9BQI6 1058 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 IL17RBQ9NRM6 502 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 TOMM22Q9NS69 142 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
IDH3A-219ENST00000560414 MYH4Q9Y623 1939 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 STRNO43815 780 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 COBLO75128 1261 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 HOXC6P09630 235 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 STAT3P40763 770 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 GMCL1P1Q8NEA9 526 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 MROH8Q9H579 483 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
IDH3A-219ENST00000560414 STX8Q9UNK0 236 aa17.41■□□□□ 0.38
IDH3A-219ENST00000560414 ORC4O43929 436 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 SLC25A27O95847 323 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 FGRP09769 529 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
IDH3A-219ENST00000560414 CYP2C19P33261 490 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 RIOX2Q8IUF8 465 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 PRPF38AQ8NAV1 312 aaKnown RBP17.4■□□□□ 0.38
IDH3A-219ENST00000560414 DIS3LQ8TF46 1054 aaKnown RBP17.4■□□□□ 0.38
IDH3A-219ENST00000560414 KIFC2Q96AC6 838 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 NBPF3Q9H094 633 aa17.4■□□□□ 0.38
IDH3A-219ENST00000560414 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
IDH3A-219ENST00000560414 BMP3P12645 472 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 MCCP23508 829 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 MFAP1P55081 439 aaKnown RBP17.39■□□□□ 0.37
IDH3A-219ENST00000560414 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 DPF3Q92784 378 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 PAWRQ96IZ0 340 aaKnown RBP17.39■□□□□ 0.37
IDH3A-219ENST00000560414 ISY1Q9ULR0 285 aaKnown RBP17.39■□□□□ 0.37
IDH3A-219ENST00000560414 SYNPO2Q9UMS6 1093 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 MTMR7Q9Y216 660 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 ZMYM6O95789 1325 aa17.39■□□□□ 0.37
IDH3A-219ENST00000560414 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
IDH3A-219ENST00000560414 HIP1O00291 1037 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms