RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 GMCL1P1Q8NEA9 526 aa27.54■■■□□ 2
CRNDE-209ENST00000560208 INCENPQ9NQS7 918 aa27.54■■■□□ 2
CRNDE-209ENST00000560208 PFASO15067 1338 aa27.53■■■□□ 2
CRNDE-209ENST00000560208 MAML3Q96JK9 1138 aa27.53■■■□□ 2
CRNDE-209ENST00000560208 ANAPC4Q9UJX5 808 aa27.53■■■□□ 2
CRNDE-209ENST00000560208 COL6A1P12109 1028 aa27.52■■■□□ 2
CRNDE-209ENST00000560208 NMIQ13287 307 aaPredicted RBP27.52■■■□□ 2
CRNDE-209ENST00000560208 KCTD2Q14681 263 aa27.52■■■□□ 2
CRNDE-209ENST00000560208 SLFN13Q68D06 897 aa27.52■■■□□ 2
CRNDE-209ENST00000560208 C7orf61Q8IZ16 206 aa27.52■■■□□ 2
CRNDE-209ENST00000560208 TEX13BQ9BXU2 312 aa27.52■■■□□ 2
CRNDE-209ENST00000560208 RBM27Q9P2N5 1060 aaKnown RBP27.52■■■□□ 2
CRNDE-209ENST00000560208 FEM1BQ9UK73 627 aa27.52■■■□□ 2
CRNDE-209ENST00000560208 SMCHD1A6NHR9 2005 aa27.51■■■□□ 2
CRNDE-209ENST00000560208 TSPY2A6NKD2 308 aa27.51■■□□□ 1.99
CRNDE-209ENST00000560208 ZBED4O75132 1171 aa27.51■■□□□ 1.99
CRNDE-209ENST00000560208 PGK2P07205 417 aa27.51■■□□□ 1.99
CRNDE-209ENST00000560208 SDSP20132 328 aa27.51■■□□□ 1.99
CRNDE-209ENST00000560208 KIFC2Q96AC6 838 aa27.51■■□□□ 1.99
CRNDE-209ENST00000560208 CTDP1Q9Y5B0 961 aaPredicted RBP27.51■■□□□ 1.99
CRNDE-209ENST00000560208 FGAP02671 866 aa27.5■■□□□ 1.99
CRNDE-209ENST00000560208 FXR1P51114 621 aaKnown RBP eCLIP27.5■■□□□ 1.99
CRNDE-209ENST00000560208 PPP4R3BQ5MIZ7 849 aa27.5■■□□□ 1.99
CRNDE-209ENST00000560208 PRAMEF19Q5SWL8 479 aa27.5■■□□□ 1.99
CRNDE-209ENST00000560208 SNRNP48Q6IEG0 339 aaKnown RBP27.5■■□□□ 1.99
CRNDE-209ENST00000560208 DIAPH3Q9NSV4 1193 aa27.5■■□□□ 1.99
CRNDE-209ENST00000560208 TACC3Q9Y6A5 838 aa27.5■■□□□ 1.99
CRNDE-209ENST00000560208 RANBP6O60518 1105 aaKnown RBP27.49■■□□□ 1.99
CRNDE-209ENST00000560208 BMP3P12645 472 aa27.49■■□□□ 1.99
CRNDE-209ENST00000560208 ZNF589Q86UQ0 364 aaPredicted RBP27.49■■□□□ 1.99
CRNDE-209ENST00000560208 CPXCR1Q8N123 301 aa27.49■■□□□ 1.99
CRNDE-209ENST00000560208 PRO3102Q9H379 93 aa27.49■■□□□ 1.99
CRNDE-209ENST00000560208 RIPK3Q9Y572 518 aa27.49■■□□□ 1.99
CRNDE-209ENST00000560208 ATP2A1O14983 1001 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 ORC4O43929 436 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 HSPD1P10809 573 aaKnown RBP27.48■■□□□ 1.99
CRNDE-209ENST00000560208 SLC4A3P48751 1232 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 ZNF792Q3KQV3 632 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 SLC38A10Q9HBR0 1119 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 IL17RBQ9NRM6 502 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 ISY1Q9ULR0 285 aaKnown RBP27.48■■□□□ 1.99
CRNDE-209ENST00000560208 STX8Q9UNK0 236 aa27.48■■□□□ 1.99
CRNDE-209ENST00000560208 DIS3Q9Y2L1 958 aaKnown RBP27.48■■□□□ 1.99
CRNDE-209ENST00000560208 SEPT4O43236 478 aa27.47■■□□□ 1.99
CRNDE-209ENST00000560208 NMT2O60551 498 aa27.47■■□□□ 1.99
CRNDE-209ENST00000560208 FGRP09769 529 aa27.47■■□□□ 1.99
CRNDE-209ENST00000560208 ANO1Q5XXA6 986 aa27.47■■□□□ 1.99
CRNDE-209ENST00000560208 RAVER2Q9HCJ3 691 aaKnown RBP27.47■■□□□ 1.99
CRNDE-209ENST00000560208 CCDC171Q6TFL3 1326 aa27.46■■□□□ 1.99
CRNDE-209ENST00000560208 TMEM232C9JQI7 657 aa27.46■■□□□ 1.99
CRNDE-209ENST00000560208 CWC27Q6UX04 472 aaKnown RBP27.46■■□□□ 1.99
CRNDE-209ENST00000560208 CHMP4CQ96CF2 233 aa27.46■■□□□ 1.99
CRNDE-209ENST00000560208 GMCL1Q96IK5 515 aa27.46■■□□□ 1.99
CRNDE-209ENST00000560208 TINF2Q9BSI4 451 aa27.46■■□□□ 1.99
CRNDE-209ENST00000560208 ZMYND8Q9ULU4 1186 aaPredicted RBP27.46■■□□□ 1.99
CRNDE-209ENST00000560208 HIP1O00291 1037 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 DNM1LO00429 736 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 MCCP23508 829 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 SLC1A4P43007 532 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 LRRC26Q2I0M4 334 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 ARRDC4Q8NCT1 418 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 CHURC1Q8WUH1 139 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 SENP6Q9GZR1 1112 aaPredicted RBP27.45■■□□□ 1.98
CRNDE-209ENST00000560208 TOMM22Q9NS69 142 aa27.45■■□□□ 1.98
CRNDE-209ENST00000560208 ZMYM6O95789 1325 aa27.44■■□□□ 1.98
CRNDE-209ENST00000560208 FDX1P10109 184 aa27.44■■□□□ 1.98
CRNDE-209ENST00000560208 STAT2P52630 851 aa27.44■■□□□ 1.98
CRNDE-209ENST00000560208 DDX11Q96FC9 970 aa27.44■■□□□ 1.98
CRNDE-209ENST00000560208 NRBP1Q9UHY1 535 aa27.44■■□□□ 1.98
CRNDE-209ENST00000560208 OAZ1P54368 228 aa27.43■■□□□ 1.98
CRNDE-209ENST00000560208 MFAP1P55081 439 aaKnown RBP27.43■■□□□ 1.98
CRNDE-209ENST00000560208 IKQ13123 557 aaPredicted RBP27.43■■□□□ 1.98
CRNDE-209ENST00000560208 RRP12Q5JTH9 1297 aaKnown RBP27.43■■□□□ 1.98
CRNDE-209ENST00000560208 GJC2Q5T442 439 aaPredicted RBP27.43■■□□□ 1.98
CRNDE-209ENST00000560208 FAM160B2Q86V87 743 aa27.43■■□□□ 1.98
CRNDE-209ENST00000560208 STAG1Q8WVM7 1258 aa27.43■■□□□ 1.98
CRNDE-209ENST00000560208 SYN1P17600 705 aa27.42■■□□□ 1.98
CRNDE-209ENST00000560208 NOVP48745 357 aa27.42■■□□□ 1.98
CRNDE-209ENST00000560208 HAND2P61296 217 aa27.42■■□□□ 1.98
CRNDE-209ENST00000560208 RCSD1Q6JBY9 416 aa27.42■■□□□ 1.98
CRNDE-209ENST00000560208 DNAJC25-GNG10A0A024R161 153 aa27.41■■□□□ 1.98
CRNDE-209ENST00000560208 PLA2G6O60733 806 aa27.41■■□□□ 1.98
CRNDE-209ENST00000560208 KCTD1Q719H9 257 aa27.41■■□□□ 1.98
CRNDE-209ENST00000560208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.41■■□□□ 1.98
CRNDE-209ENST00000560208 CHST13Q8NET6 341 aa27.41■■□□□ 1.98
CRNDE-209ENST00000560208 FBXO40Q9UH90 709 aa27.41■■□□□ 1.98
CRNDE-209ENST00000560208 TAL1P17542 331 aaPredicted RBP27.4■■□□□ 1.98
CRNDE-209ENST00000560208 GDF15Q99988 308 aa27.4■■□□□ 1.98
CRNDE-209ENST00000560208 MTMR7Q9Y216 660 aa27.4■■□□□ 1.98
CRNDE-209ENST00000560208 MCM3APO60318 1980 aa27.39■■□□□ 1.98
CRNDE-209ENST00000560208 KBTBD13C9JR72 458 aa27.39■■□□□ 1.98
CRNDE-209ENST00000560208 MYCNP04198 464 aaPredicted RBP27.39■■□□□ 1.98
CRNDE-209ENST00000560208 ANKRD35Q8N283 1001 aa27.39■■□□□ 1.98
CRNDE-209ENST00000560208 MSL3Q8N5Y2 521 aaKnown RBP27.39■■□□□ 1.98
CRNDE-209ENST00000560208 CNPY2Q9Y2B0 182 aa27.39■■□□□ 1.98
CRNDE-209ENST00000560208 A0A1W2PPC1 479 aa27.38■■□□□ 1.97
CRNDE-209ENST00000560208 ATN1P54259 1190 aaPredicted RBP27.38■■□□□ 1.97
CRNDE-209ENST00000560208 AKNAD1Q5T1N1 836 aa27.38■■□□□ 1.97
CRNDE-209ENST00000560208 MFSD6Q6ZSS7 791 aa27.38■■□□□ 1.97
CRNDE-209ENST00000560208 RASGRP2Q7LDG7 609 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms