RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 TSPY2A6NKD2 308 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 ATP2A1O14983 1001 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 ZBED4O75132 1171 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 FGAP02671 866 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 FGRP09769 529 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 HSPD1P10809 573 aaKnown RBP24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 BMP3P12645 472 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 KCTD2Q14681 263 aa24.26■■□□□ 1.47
CHRNA3-207ENST00000559941 ORC4O43929 436 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 ZNF792Q3KQV3 632 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 SNRNP48Q6IEG0 339 aaKnown RBP24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 ZNF589Q86UQ0 364 aaPredicted RBP24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 KIFC2Q96AC6 838 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 PRO3102Q9H379 93 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 SLC38A10Q9HBR0 1119 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 IL17RBQ9NRM6 502 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 DIS3Q9Y2L1 958 aaKnown RBP24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 ZMYM6O95789 1325 aa24.25■■□□□ 1.47
CHRNA3-207ENST00000559941 PGK2P07205 417 aa24.24■■□□□ 1.47
CHRNA3-207ENST00000559941 SDSP20132 328 aa24.24■■□□□ 1.47
CHRNA3-207ENST00000559941 GMCL1Q96IK5 515 aa24.24■■□□□ 1.47
CHRNA3-207ENST00000559941 RIPK3Q9Y572 518 aa24.24■■□□□ 1.47
CHRNA3-207ENST00000559941 CTDP1Q9Y5B0 961 aaPredicted RBP24.24■■□□□ 1.47
CHRNA3-207ENST00000559941 CCDC171Q6TFL3 1326 aa24.24■■□□□ 1.47
CHRNA3-207ENST00000559941 SEPT4O43236 478 aa24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 RANBP6O60518 1105 aaKnown RBP24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 FXR1P51114 621 aaKnown RBP eCLIP24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 C7orf61Q8IZ16 206 aa24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 CPXCR1Q8N123 301 aa24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 RBM27Q9P2N5 1060 aaKnown RBP24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 STX8Q9UNK0 236 aa24.23■■□□□ 1.47
CHRNA3-207ENST00000559941 NMT2O60551 498 aa24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 FDX1P10109 184 aa24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 NOVP48745 357 aa24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 PRAMEF19Q5SWL8 479 aa24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 RAVER2Q9HCJ3 691 aaKnown RBP24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 NRBP1Q9UHY1 535 aa24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 RANBP2P49792 3224 aaKnown RBP24.22■■□□□ 1.47
CHRNA3-207ENST00000559941 TMEM232C9JQI7 657 aa24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 SLC1A4P43007 532 aa24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 OAZ1P54368 228 aa24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 MFAP1P55081 439 aaKnown RBP24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 CHURC1Q8WUH1 139 aa24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 STAG1Q8WVM7 1258 aa24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 TINF2Q9BSI4 451 aa24.21■■□□□ 1.47
CHRNA3-207ENST00000559941 DNM1LO00429 736 aa24.2■■□□□ 1.46
CHRNA3-207ENST00000559941 PLA2G6O60733 806 aa24.2■■□□□ 1.46
CHRNA3-207ENST00000559941 MCCP23508 829 aa24.2■■□□□ 1.46
CHRNA3-207ENST00000559941 STAT2P52630 851 aa24.2■■□□□ 1.46
CHRNA3-207ENST00000559941 FAM160B2Q86V87 743 aa24.2■■□□□ 1.46
CHRNA3-207ENST00000559941 SLC4A3P48751 1232 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 ANO1Q5XXA6 986 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 RCSD1Q6JBY9 416 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 ARRDC4Q8NCT1 418 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 CHST13Q8NET6 341 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 DDX11Q96FC9 970 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 TOMM22Q9NS69 142 aa24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 ISY1Q9ULR0 285 aaKnown RBP24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 ZMYND8Q9ULU4 1186 aaPredicted RBP24.19■■□□□ 1.46
CHRNA3-207ENST00000559941 DNAJC25-GNG10A0A024R161 153 aa24.18■■□□□ 1.46
CHRNA3-207ENST00000559941 LRRC26Q2I0M4 334 aa24.18■■□□□ 1.46
CHRNA3-207ENST00000559941 RRP12Q5JTH9 1297 aaKnown RBP24.18■■□□□ 1.46
CHRNA3-207ENST00000559941 SENP6Q9GZR1 1112 aaPredicted RBP24.18■■□□□ 1.46
CHRNA3-207ENST00000559941 TCP11L1Q9NUJ3 509 aa24.18■■□□□ 1.46
CHRNA3-207ENST00000559941 FBXO40Q9UH90 709 aa24.18■■□□□ 1.46
CHRNA3-207ENST00000559941 HIP1O00291 1037 aa24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 PCP11498 1178 aaKnown RBP24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 HAND2P61296 217 aa24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 GJC2Q5T442 439 aaPredicted RBP24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 CWC27Q6UX04 472 aaKnown RBP24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 KCTD1Q719H9 257 aa24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 MSL3Q8N5Y2 521 aaKnown RBP24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 CHMP4CQ96CF2 233 aa24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 DIAPH3Q9NSV4 1193 aa24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 LAMA4Q16363 1823 aa24.17■■□□□ 1.46
CHRNA3-207ENST00000559941 MCM3APO60318 1980 aa24.16■■□□□ 1.46
CHRNA3-207ENST00000559941 A0A1W2PPC1 479 aa24.16■■□□□ 1.46
CHRNA3-207ENST00000559941 IKQ13123 557 aaPredicted RBP24.16■■□□□ 1.46
CHRNA3-207ENST00000559941 AKNAD1Q5T1N1 836 aa24.16■■□□□ 1.46
CHRNA3-207ENST00000559941 GDF15Q99988 308 aa24.16■■□□□ 1.46
CHRNA3-207ENST00000559941 ZNF536O15090 1300 aa24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 ZNF865P0CJ78 1059 aaPredicted RBP24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 MAMDC4Q6UXC1 1216 aa24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 MFSD6Q6ZSS7 791 aa24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 ZNF467Q7Z7K2 595 aaPredicted RBP24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 ANKRD35Q8N283 1001 aa24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 DCAF4Q8WV16 495 aa24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 DNAH12Q6ZR08 3092 aa24.15■■□□□ 1.46
CHRNA3-207ENST00000559941 SYNGAP1Q96PV0 1343 aa24.14■■□□□ 1.46
CHRNA3-207ENST00000559941 KBTBD13C9JR72 458 aa24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 TOP1P11387 765 aaKnown RBP24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 TAL1P17542 331 aaPredicted RBP24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 SYN1P17600 705 aa24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 RASGRP2Q7LDG7 609 aa24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 TMEM47Q9BQJ4 181 aa24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 RNF41Q9H4P4 317 aaPredicted RBP24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 PRR12Q9ULL5 1215 aa24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 CNPY2Q9Y2B0 182 aa24.14■■□□□ 1.45
CHRNA3-207ENST00000559941 RARBP10826 455 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms