RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PICK1Q9NRD5 415 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 PCDHGC3Q9UN70 934 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 AGTPBP1Q9UPW5 1226 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 AKAP2Q9Y2D5 859 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 CEP290O15078 2479 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 CCER2I3L3R5 266 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 ADCY3O60266 1144 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 PEX10O60683 326 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 HOXD10P28358 340 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 IRF5Q13568 498 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 SPTY2D1Q68D10 685 aaPredicted RBP7.15□□□□□ -1.26
USP3-215ENST00000559771 ATF7IPQ6VMQ6 1270 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 GADL1Q6ZQY3 521 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 CD163Q86VB7 1156 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 METTL16Q86W50 562 aaKnown RBP7.15□□□□□ -1.26
USP3-215ENST00000559771 ANKRD13CQ8N6S4 541 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 SH3RF3Q8TEJ3 882 aaPredicted RBP7.15□□□□□ -1.26
USP3-215ENST00000559771 U2AF1L4Q8WU68 220 aaKnown RBP7.15□□□□□ -1.26
USP3-215ENST00000559771 CLUAP1Q96AJ1 413 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 NEUROD6Q96NK8 337 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 RNF208Q9H0X6 261 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 PAK6Q9NQU5 681 aaPredicted RBP7.15□□□□□ -1.26
USP3-215ENST00000559771 HDAC5Q9UQL6 1122 aa7.15□□□□□ -1.26
USP3-215ENST00000559771 LAMA3Q16787 3333 aa7.15□□□□□ -1.27
USP3-215ENST00000559771 SGPL1O95470 568 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 GNAI2P04899 355 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 INHAP05111 366 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 CYP2E1P05181 493 aaPredicted RBP7.14□□□□□ -1.27
USP3-215ENST00000559771 PRKCSHP14314 528 aaPredicted RBP7.14□□□□□ -1.27
USP3-215ENST00000559771 CAP2P40123 477 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 CTSOP43234 321 aaPredicted RBP7.14□□□□□ -1.27
USP3-215ENST00000559771 SPP2Q13103 211 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 ARTNQ5T4W7 220 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 TMEM57Q8N5G2 664 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 PROCA1Q8NCQ7 364 aaPredicted RBP7.14□□□□□ -1.27
USP3-215ENST00000559771 SSH3Q8TE77 659 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 DBNDD2Q9BQY9 259 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP3-215ENST00000559771 SNRKQ9NRH2 765 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 GJD2Q9UKL4 321 aa7.14□□□□□ -1.27
USP3-215ENST00000559771 DDX60LQ5H9U9 1706 aaKnown RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 FLT1P17948 1338 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 TNPO2O14787 897 aaKnown RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 ZBTB7BO15156 539 aaPredicted RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 MAP4K4O95819 1239 aaPredicted RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 LDHCP07864 332 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 RLBP1P12271 317 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 HMGCS2P54868 508 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 ATP8B2P98198 1209 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 FAM110CQ1W6H9 321 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 Q6ZVU0 165 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 TEX11Q8IYF3 940 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 ZNF280CQ8ND82 737 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 DIS3LQ8TF46 1054 aaKnown RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 ASCC2Q9H1I8 757 aaPredicted RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 TXNRD2Q9NNW7 524 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 GPR108Q9NPR9 543 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 PIH1D3Q9NQM4 214 aaKnown RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 AATFQ9NY61 560 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP3-215ENST00000559771 TLR7Q9NYK1 1049 aaKnown RBP7.13□□□□□ -1.27
USP3-215ENST00000559771 RAI14Q9P0K7 980 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 FPGT-TNNI3KV9GXZ4 949 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 TRIOBPQ9H2D6 2365 aa7.13□□□□□ -1.27
USP3-215ENST00000559771 COL6A3P12111 3177 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 MYH1P12882 1939 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 UQCRFS1P1P0C7P4 283 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 ZAP70P43403 619 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 UBXN2AP68543 259 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 GSTO1P78417 241 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 CBLBQ13191 982 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 G3BP1Q13283 466 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP3-215ENST00000559771 SMCR8Q8TEV9 937 aaPredicted RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 TGFBRAP1Q8WUH2 860 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 DPF3Q92784 378 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 FRAT1Q92837 279 aaPredicted RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 EAF2Q96CJ1 260 aaPredicted RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 DEFB118Q96PH6 123 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 WDR18Q9BV38 432 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 C1orf115Q9H7X2 142 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 LRP2BPQ9P2M1 347 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 PI4KBQ9UBF8 816 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 MORF4L1Q9UBU8 362 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 HERC5Q9UII4 1024 aaKnown RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 DBNLQ9UJU6 430 aaKnown RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
USP3-215ENST00000559771 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
USP3-215ENST00000559771 DNAH12Q6ZR08 3092 aa7.11□□□□□ -1.27
USP3-215ENST00000559771 SOX1O00570 391 aaPredicted RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 HOXA7P31268 230 aaPredicted RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 GCLCP48506 637 aaPredicted RBP7.11□□□□□ -1.27
USP3-215ENST00000559771 BACE1P56817 501 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms