RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 A0A0U1RQG5 324 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-207ENST00000559734 VWA5AO00534 786 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 ASGR1P07306 291 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
TRAF3-207ENST00000559734 PDE6AP16499 860 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 CYP2C18P33260 490 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 COPB2P35606 906 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 TFF2Q03403 129 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 FAM83BQ5T0W9 1011 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 SLC9C2Q5TAH2 1124 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 RASIP1Q5U651 963 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 AACSQ86V21 672 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 TMEM57Q8N5G2 664 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 C1QTNF1Q9BXJ1 281 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 BCL11AQ9H165 835 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 DCP1AQ9NPI6 582 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-207ENST00000559734 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
TRAF3-207ENST00000559734 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
TRAF3-207ENST00000559734 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
TRAF3-207ENST00000559734 ARVCFO00192 962 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 DUSP11O75319 330 aaKnown RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 SNAI1O95863 264 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 RABGGTBP53611 331 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 SNRNP48Q6IEG0 339 aaKnown RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 CCSAPQ6IQ19 270 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 OTOP2Q7RTS6 562 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 FAM126BQ8IXS8 530 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 PCSK9Q8NBP7 692 aaKnown RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 ELP1O95163 1332 aa13.02□□□□□ -0.33
TRAF3-207ENST00000559734 COL11A1P12107 1806 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-207ENST00000559734 MUC3AQ02505 3323 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 CYP2D7A0A087X1C5 515 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 FGBP02675 491 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 CDK7P50613 346 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 KCNQ1P51787 676 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 TTF1Q15361 905 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-207ENST00000559734 GNASQ5JWF2 1037 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-207ENST00000559734 HERVK_113Q902F9 699 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 DNAJC2Q99543 621 aaKnown RBP13.01□□□□□ -0.33
TRAF3-207ENST00000559734 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-207ENST00000559734 SYNGAP1Q96PV0 1343 aa13.01□□□□□ -0.33
TRAF3-207ENST00000559734 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 UMODL1Q5DID0 1318 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 ZBBXA8MT70 800 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 SMIM22K7EJ46 135 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 GOLIM4O00461 696 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 ADCY6O43306 1168 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 PRKAB2O43741 272 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 MYOGP15173 224 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 CST5P28325 142 aaPredicted RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 CDK8P49336 464 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 CCL23P55773 120 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 CCDC144BQ3MJ40 725 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 AMOTL1Q8IY63 956 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 CPXCR1Q8N123 301 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 MSL3Q8N5Y2 521 aaKnown RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 REPS2Q8NFH8 660 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 CCDC17Q96LX7 622 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 TEX13BQ9BXU2 312 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 HIPK3Q9H422 1215 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
TRAF3-207ENST00000559734 RIPK3Q9Y572 518 aa13□□□□□ -0.33
TRAF3-207ENST00000559734 PARP14Q460N5 1801 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 MBD4O95243 580 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 BMP1P13497 986 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 BEX3Q00994 111 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 AAK1Q2M2I8 961 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 SLF1Q9BQI6 1058 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
TRAF3-207ENST00000559734 TCF20Q9UGU0 1960 aaKnown RBP12.98□□□□□ -0.33
TRAF3-207ENST00000559734 MYH8P13535 1937 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 GJA9P57773 515 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 CXCL17Q6UXB2 119 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 MAMDC4Q6UXC1 1216 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 ANKRD35Q8N283 1001 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 UPF3AQ9H1J1 476 aaKnown RBP12.98□□□□□ -0.33
TRAF3-207ENST00000559734 ABHD16BQ9H3Z7 469 aa12.98□□□□□ -0.33
TRAF3-207ENST00000559734 EPHX3Q9H6B9 360 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms