RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 FAM20CQ8IXL6 584 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 FBXO41Q8TF61 875 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 TMPRSS13Q9BYE2 586 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 CLEC4MQ9H2X3 399 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-216ENST00000559496 DBF4Q9UBU7 674 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-216ENST00000559496 DDX19BQ9UMR2 479 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 LAMB4A4D0S4 1761 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 GRIA4P48058 902 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 NAP1L5Q96NT1 182 aaPredicted RBP8.65□□□□□ -1.02
ZEB1-216ENST00000559496 FAM83CQ9BQN1 747 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 USP26Q9BXU7 913 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 NIF3L1Q9GZT8 377 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 DNAJC25Q9H1X3 360 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 HIF3AQ9Y2N7 669 aa8.65□□□□□ -1.02
ZEB1-216ENST00000559496 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 SOWAHDA6NJG2 315 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 BRD1O95696 1058 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 IGHA2P01877 340 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 ANXA1P04083 346 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 BMP3P12645 472 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 PREPP48147 710 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 PCDH1Q08174 1060 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 SPRED3Q2MJR0 410 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 EXOSC6Q5RKV6 272 aaKnown RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 L1TD1Q5T7N2 865 aaKnown RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 ZNF772Q68DY9 489 aaPredicted RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 HOMEZQ8IX15 550 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 SMG8Q8ND04 991 aaKnown RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 DMRTB1Q96MA1 342 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 MAP7D2Q96T17 732 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 RBCK1Q9BYM8 510 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 EHD4Q9H223 541 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 CHMP4BQ9H444 224 aaKnown RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 SUGCTQ9HAC7 445 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 CYP4F12Q9HCS2 524 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 DDX21Q9NR30 783 aaKnown RBP eCLIP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
ZEB1-216ENST00000559496 USP16Q9Y5T5 823 aa8.64□□□□□ -1.03
ZEB1-216ENST00000559496 F6X3S4 739 aa8.63□□□□□ -1.03
ZEB1-216ENST00000559496 NFIAQ12857 509 aa8.63□□□□□ -1.03
ZEB1-216ENST00000559496 ZNF423Q2M1K9 1284 aa8.63□□□□□ -1.03
ZEB1-216ENST00000559496 PROSER3Q2NL68 480 aa8.63□□□□□ -1.03
ZEB1-216ENST00000559496 RNF43Q68DV7 783 aa8.63□□□□□ -1.03
ZEB1-216ENST00000559496 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
ZEB1-216ENST00000559496 SLC4A10Q6U841 1118 aa8.63□□□□□ -1.03
ZEB1-216ENST00000559496 PXDNLA1KZ92 1463 aa8.62□□□□□ -1.03
ZEB1-216ENST00000559496 HMX2A2RU54 273 aa8.62□□□□□ -1.03
ZEB1-216ENST00000559496 EIF1AYO14602 144 aaKnown RBP8.62□□□□□ -1.03
ZEB1-216ENST00000559496 GPR182O15218 404 aa8.62□□□□□ -1.03
ZEB1-216ENST00000559496 MYL6BP14649 208 aa8.62□□□□□ -1.03
ZEB1-216ENST00000559496 CCT4P50991 539 aaKnown RBP8.62□□□□□ -1.03
ZEB1-216ENST00000559496 SMAP1Q8IYB5 467 aaPredicted RBP8.62□□□□□ -1.03
ZEB1-216ENST00000559496 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
ZEB1-216ENST00000559496 CCDC74AQ96AQ1 378 aa8.62□□□□□ -1.03
ZEB1-216ENST00000559496 ALKBH8Q96BT7 664 aaKnown RBP8.62□□□□□ -1.03
ZEB1-216ENST00000559496 KCNF1Q9H3M0 494 aa8.62□□□□□ -1.03
ZEB1-216ENST00000559496 KCNQ2O43526 872 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 GAS2O43903 313 aaKnown RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 DDX58O95786 925 aaKnown RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 DLGAP3O95886 979 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 CD97P48960 835 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 BEND4Q6ZU67 534 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 DNAJC10Q8IXB1 793 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 SMARCC1Q92922 1105 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 CSRNP1Q96S65 589 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 TEX13AQ9BXU3 409 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 RRAGDQ9NQL2 400 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 ZBTB40Q9NUA8 1239 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 ADCY9O60503 1353 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 PALLDQ8WX93 1383 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 N4BP2Q86UW6 1770 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 PI4KAP2A4QPH2 592 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 TIAF1O95411 115 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 STARD3NLO95772 234 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 CYP11A1P05108 521 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 ITPKAP23677 461 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 PIP4K2AP48426 406 aaPredicted RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 RBM6P78332 1123 aaKnown RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 AIMP1Q12904 312 aaKnown RBP8.61□□□□□ -1.03
ZEB1-216ENST00000559496 NFKBIBQ15653 356 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 KSR2Q6VAB6 950 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 PI4KAP1Q8N8J0 262 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 XAGE3Q8WTP9 111 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 DNAAF4Q8WXU2 420 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 ZFYVE1Q9HBF4 777 aa8.61□□□□□ -1.03
ZEB1-216ENST00000559496 NHSQ6T4R5 1651 aa8.6□□□□□ -1.03
ZEB1-216ENST00000559496 A1BGP04217 495 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms