RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 FGAP02671 866 aa29.84■■■□□ 2.37
CRNDE-206ENST00000559432 PGK2P07205 417 aa29.84■■■□□ 2.37
CRNDE-206ENST00000559432 SLC4A3P48751 1232 aa29.84■■■□□ 2.37
CRNDE-206ENST00000559432 MFAP1P55081 439 aaKnown RBP29.84■■■□□ 2.37
CRNDE-206ENST00000559432 CPXCR1Q8N123 301 aa29.84■■■□□ 2.37
CRNDE-206ENST00000559432 INCENPQ9NQS7 918 aa29.84■■■□□ 2.37
CRNDE-206ENST00000559432 TOMM22Q9NS69 142 aa29.84■■■□□ 2.37
CRNDE-206ENST00000559432 PFASO15067 1338 aa29.83■■■□□ 2.37
CRNDE-206ENST00000559432 CCDC171Q6TFL3 1326 aa29.83■■■□□ 2.37
CRNDE-206ENST00000559432 HSPD1P10809 573 aaKnown RBP29.83■■■□□ 2.37
CRNDE-206ENST00000559432 ORC4O43929 436 aa29.82■■■□□ 2.36
CRNDE-206ENST00000559432 COL6A1P12109 1028 aa29.82■■■□□ 2.36
CRNDE-206ENST00000559432 SDSP20132 328 aa29.82■■■□□ 2.36
CRNDE-206ENST00000559432 IKQ13123 557 aaPredicted RBP29.82■■■□□ 2.36
CRNDE-206ENST00000559432 ZNF589Q86UQ0 364 aaPredicted RBP29.82■■■□□ 2.36
CRNDE-206ENST00000559432 DIS3Q9Y2L1 958 aaKnown RBP29.82■■■□□ 2.36
CRNDE-206ENST00000559432 ZMYM6O95789 1325 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 TMEM232C9JQI7 657 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 ATP2A1O14983 1001 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 SEPT4O43236 478 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 SLC1A4P43007 532 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 DDX11Q96FC9 970 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 GMCL1Q96IK5 515 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 SLC38A10Q9HBR0 1119 aa29.81■■■□□ 2.36
CRNDE-206ENST00000559432 RAVER2Q9HCJ3 691 aaKnown RBP29.81■■■□□ 2.36
CRNDE-206ENST00000559432 FDX1P10109 184 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 STAT2P52630 851 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 ZNF792Q3KQV3 632 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 PRAMEF19Q5SWL8 479 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 FAM160B2Q86V87 743 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 CHURC1Q8WUH1 139 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 IL17RBQ9NRM6 502 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 RBM27Q9P2N5 1060 aaKnown RBP29.8■■■□□ 2.36
CRNDE-206ENST00000559432 RIPK3Q9Y572 518 aa29.8■■■□□ 2.36
CRNDE-206ENST00000559432 NMT2O60551 498 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 FGRP09769 529 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 OAZ1P54368 228 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 RRP12Q5JTH9 1297 aaKnown RBP29.79■■■□□ 2.36
CRNDE-206ENST00000559432 ARRDC4Q8NCT1 418 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 TINF2Q9BSI4 451 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 DIAPH3Q9NSV4 1193 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 NRBP1Q9UHY1 535 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 TACC3Q9Y6A5 838 aa29.79■■■□□ 2.36
CRNDE-206ENST00000559432 DNM1LO00429 736 aa29.78■■■□□ 2.36
CRNDE-206ENST00000559432 MCCP23508 829 aa29.78■■■□□ 2.36
CRNDE-206ENST00000559432 CHMP4CQ96CF2 233 aa29.78■■■□□ 2.36
CRNDE-206ENST00000559432 SENP6Q9GZR1 1112 aaPredicted RBP29.78■■■□□ 2.36
CRNDE-206ENST00000559432 FBXO40Q9UH90 709 aa29.78■■■□□ 2.36
CRNDE-206ENST00000559432 FRMPD3Q5JV73 1810 aa29.78■■■□□ 2.36
CRNDE-206ENST00000559432 HIP1O00291 1037 aa29.77■■■□□ 2.36
CRNDE-206ENST00000559432 FXR1P51114 621 aaKnown RBP eCLIP29.77■■■□□ 2.36
CRNDE-206ENST00000559432 ANO1Q5XXA6 986 aa29.77■■■□□ 2.36
CRNDE-206ENST00000559432 STAG1Q8WVM7 1258 aa29.77■■■□□ 2.36
CRNDE-206ENST00000559432 ZMYND8Q9ULU4 1186 aaPredicted RBP29.77■■■□□ 2.36
CRNDE-206ENST00000559432 ALPK3Q96L96 1907 aa29.77■■■□□ 2.36
CRNDE-206ENST00000559432 HAND2P61296 217 aa29.76■■■□□ 2.35
CRNDE-206ENST00000559432 RCSD1Q6JBY9 416 aa29.76■■■□□ 2.35
CRNDE-206ENST00000559432 CWC27Q6UX04 472 aaKnown RBP29.76■■■□□ 2.35
CRNDE-206ENST00000559432 KBTBD13C9JR72 458 aa29.75■■■□□ 2.35
CRNDE-206ENST00000559432 MYCNP04198 464 aaPredicted RBP29.75■■■□□ 2.35
CRNDE-206ENST00000559432 GJC2Q5T442 439 aaPredicted RBP29.75■■■□□ 2.35
CRNDE-206ENST00000559432 ANKRD35Q8N283 1001 aa29.75■■■□□ 2.35
CRNDE-206ENST00000559432 CHST13Q8NET6 341 aa29.75■■■□□ 2.35
CRNDE-206ENST00000559432 MTMR7Q9Y216 660 aa29.75■■■□□ 2.35
CRNDE-206ENST00000559432 CNPY2Q9Y2B0 182 aa29.75■■■□□ 2.35
CRNDE-206ENST00000559432 PCP11498 1178 aaKnown RBP29.74■■■□□ 2.35
CRNDE-206ENST00000559432 LRRC26Q2I0M4 334 aa29.74■■■□□ 2.35
CRNDE-206ENST00000559432 MFSD6Q6ZSS7 791 aa29.74■■■□□ 2.35
CRNDE-206ENST00000559432 KCTD1Q719H9 257 aa29.74■■■□□ 2.35
CRNDE-206ENST00000559432 MSL3Q8N5Y2 521 aaKnown RBP29.74■■■□□ 2.35
CRNDE-206ENST00000559432 PRO3102Q9H379 93 aa29.74■■■□□ 2.35
CRNDE-206ENST00000559432 RNF41Q9H4P4 317 aaPredicted RBP29.74■■■□□ 2.35
CRNDE-206ENST00000559432 PLA2G6O60733 806 aa29.73■■■□□ 2.35
CRNDE-206ENST00000559432 SYN1P17600 705 aa29.73■■■□□ 2.35
CRNDE-206ENST00000559432 NOVP48745 357 aa29.73■■■□□ 2.35
CRNDE-206ENST00000559432 CCDC96Q2M329 555 aa29.73■■■□□ 2.35
CRNDE-206ENST00000559432 AKNAD1Q5T1N1 836 aa29.73■■■□□ 2.35
CRNDE-206ENST00000559432 ZNFX1Q9P2E3 1918 aaKnown RBP29.73■■■□□ 2.35
CRNDE-206ENST00000559432 DNAJC25-GNG10A0A024R161 153 aa29.72■■■□□ 2.35
CRNDE-206ENST00000559432 RARBP10826 455 aa29.72■■■□□ 2.35
CRNDE-206ENST00000559432 TOP1P11387 765 aaKnown RBP29.72■■■□□ 2.35
CRNDE-206ENST00000559432 IRX6P78412 446 aaPredicted RBP29.72■■■□□ 2.35
CRNDE-206ENST00000559432 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.72■■■□□ 2.35
CRNDE-206ENST00000559432 HOMER2Q9NSB8 354 aa29.72■■■□□ 2.35
CRNDE-206ENST00000559432 TCP11L1Q9NUJ3 509 aa29.72■■■□□ 2.35
CRNDE-206ENST00000559432 ZNF213O14771 459 aa29.71■■■□□ 2.35
CRNDE-206ENST00000559432 DCAF4Q8WV16 495 aa29.71■■■□□ 2.35
CRNDE-206ENST00000559432 SYNGAP1Q96PV0 1343 aa29.71■■■□□ 2.35
CRNDE-206ENST00000559432 CEP290O15078 2479 aa29.7■■■□□ 2.35
CRNDE-206ENST00000559432 A0A1W2PPC1 479 aa29.7■■■□□ 2.35
CRNDE-206ENST00000559432 ATN1P54259 1190 aaPredicted RBP29.7■■■□□ 2.35
CRNDE-206ENST00000559432 ACAD9Q9H845 621 aa29.7■■■□□ 2.35
CRNDE-206ENST00000559432 PLXNA1Q9UIW2 1896 aa29.7■■■□□ 2.34
CRNDE-206ENST00000559432 AKR1A1P14550 325 aa29.69■■■□□ 2.34
CRNDE-206ENST00000559432 TAL1P17542 331 aaPredicted RBP29.69■■■□□ 2.34
CRNDE-206ENST00000559432 ZNF467Q7Z7K2 595 aaPredicted RBP29.69■■■□□ 2.34
CRNDE-206ENST00000559432 TBC1D10CQ8IV04 446 aa29.69■■■□□ 2.34
CRNDE-206ENST00000559432 TMEM47Q9BQJ4 181 aa29.69■■■□□ 2.34
CRNDE-206ENST00000559432 XPNPEP3Q9NQH7 507 aa29.69■■■□□ 2.34
CRNDE-206ENST00000559432 PRR12Q9ULL5 1215 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms