RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RXRAP19793 462 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 STAT2P52630 851 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 FGD1P98174 961 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 SCRN1Q12765 414 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 COG2Q14746 738 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 FAM160B2Q86V87 743 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 LZTS2Q9BRK4 669 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 TMEM232C9JQI7 657 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 IFNAR1P17181 557 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 KIF5BP33176 963 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 ADD1P35611 737 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 METAP2P50579 478 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 SYNE3Q6ZMZ3 975 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 PRPF38AQ8NAV1 312 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 CHURC1Q8WUH1 139 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 SLF1Q9BQI6 1058 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 SH2B1Q9NRF2 756 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 PRR12Q9ULL5 1215 aa17.25■□□□□ 0.35
SNRPA1-207ENST00000559309 FRMPD2Q68DX3 1309 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 CNTNAP5Q8WYK1 1306 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 CA12O43570 354 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 CNMDO75829 334 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 CTDNEP1O95476 244 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 FDX1P10109 184 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 GNAQP50148 359 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 CUL4AQ13619 759 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 RTN1Q16799 776 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 RAB11FIP4Q86YS3 637 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 P2RX7Q99572 595 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 JMJD4Q9H9V9 463 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 HOXC10Q9NYD6 342 aa17.24■□□□□ 0.35
SNRPA1-207ENST00000559309 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 ALDH1A1P00352 501 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 HERVK_113P62684 666 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 SYDE2Q5VT97 1194 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 ADGRF4Q8IZF3 695 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 CPVLQ9H3G5 476 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 NCOA5Q9HCD5 579 aaKnown RBP17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 GPCPD1Q9NPB8 672 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 MORF4L1Q9UBU8 362 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
SNRPA1-207ENST00000559309 VWA5AO00534 786 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 FLOT1O75955 427 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 BCRP11274 1271 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 OSBPP22059 807 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 SLC16A2P36021 539 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 RGS19P49795 217 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 CCDC96Q2M329 555 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 CCDC144CPQ8IYA2 1237 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 GTF3C2Q8WUA4 911 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 ATG4CQ96DT6 458 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 UBA5Q9GZZ9 404 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 ZNF214Q9UL59 606 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-207ENST00000559309 CYP2C8P10632 490 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 OAZ1P54368 228 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 GRM1Q13255 1194 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 C17orf99Q6UX52 265 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 SAGE1Q9NXZ1 904 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 MTMR7Q9Y216 660 aa17.21■□□□□ 0.35
SNRPA1-207ENST00000559309 STK36Q9NRP7 1315 aa17.21■□□□□ 0.34
SNRPA1-207ENST00000559309 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.34
SNRPA1-207ENST00000559309 SMCHD1A6NHR9 2005 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 TLR2O60603 784 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 PKN1Q16512 942 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-207ENST00000559309 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms