RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 TINF2Q9BSI4 451 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLPX-205ENST00000559218 A0A1W2PQ45 241 aaPredicted RBP10.4□□□□□ -0.74
CLPX-205ENST00000559218 A0A1W2PQY0 241 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 RAD21O60216 631 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 PQBP1O60828 265 aaKnown RBP10.4□□□□□ -0.74
CLPX-205ENST00000559218 CLTBP09497 229 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 ZNF865P0CJ78 1059 aaPredicted RBP10.4□□□□□ -0.74
CLPX-205ENST00000559218 ATP5JP18859 108 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 STAT3P40763 770 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 KCTD2Q14681 263 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 FAM83BQ5T0W9 1011 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 IER5LQ5T953 404 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 CTR9Q6PD62 1173 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 HAUS7Q99871 368 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 KANSL2Q9H9L4 492 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 SCUBE2Q9NQ36 999 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 NRBP1Q9UHY1 535 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 ZNF214Q9UL59 606 aaPredicted RBP10.4□□□□□ -0.74
CLPX-205ENST00000559218 PPP1R9AQ9ULJ8 1098 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 SLC4A4Q9Y6R1 1079 aa10.4□□□□□ -0.74
CLPX-205ENST00000559218 KIAA0355O15063 1070 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 ADAMTS4O75173 837 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 UBE3CQ15386 1083 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 RNF180Q86T96 592 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 RPAP2Q8IXW5 612 aaPredicted RBP10.39□□□□□ -0.75
CLPX-205ENST00000559218 RNPC3Q96LT9 517 aaKnown RBP10.39□□□□□ -0.75
CLPX-205ENST00000559218 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLPX-205ENST00000559218 PUS7LQ9H0K6 701 aaKnown RBP10.39□□□□□ -0.75
CLPX-205ENST00000559218 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 ZBTB40Q9NUA8 1239 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 RIPK3Q9Y572 518 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 TACC3Q9Y6A5 838 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 ROBO3Q96MS0 1386 aa10.39□□□□□ -0.75
CLPX-205ENST00000559218 CHD7Q9P2D1 2997 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 ZBED9Q6R2W3 1325 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 MYADML2A6NDP7 307 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 TTLL13PA6NNM8 815 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 RAB11FIP3O75154 756 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 HMMRO75330 724 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 SNAI1O95863 264 aaPredicted RBP10.38□□□□□ -0.75
CLPX-205ENST00000559218 AKR1A1P14550 325 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 FOSL2P15408 326 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 RAG1P15918 1043 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 ACLYP53396 1101 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 IRX5P78411 483 aaPredicted RBP10.38□□□□□ -0.75
CLPX-205ENST00000559218 FAAP100Q0VG06 881 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 AMOTL1Q8IY63 956 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 STK11IPQ8N1F8 1099 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 CNPY2Q9Y2B0 182 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 DIS3Q9Y2L1 958 aaKnown RBP10.38□□□□□ -0.75
CLPX-205ENST00000559218 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
CLPX-205ENST00000559218 SYNRGQ9UMZ2 1314 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 BAZ2AQ9UIF9 1905 aaKnown RBP10.37□□□□□ -0.75
CLPX-205ENST00000559218 ADCY6O43306 1168 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 SMARCA5O60264 1052 aaPredicted RBP10.37□□□□□ -0.75
CLPX-205ENST00000559218 SEC24BO95487 1268 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 RASA1P20936 1047 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 FPGSQ05932 587 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 GRIN2CQ14957 1233 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
CLPX-205ENST00000559218 CCSAPQ6IQ19 270 aaPredicted RBP10.37□□□□□ -0.75
CLPX-205ENST00000559218 ANKRD33Q7Z3H0 272 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 SLF1Q9BQI6 1058 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 TEX13BQ9BXU2 312 aa10.37□□□□□ -0.75
CLPX-205ENST00000559218 PARP14Q460N5 1801 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 DNAJC25-GNG10A0A024R161 153 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 GSG1L2A8MUP6 293 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 F5H6K3 240 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 NDUFB10O96000 172 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 COPB2P35606 906 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 SLC4A3P48751 1232 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 KLRC3Q07444 240 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 KCNA10Q16322 511 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 USP38Q8NB14 1042 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 KLHDC9Q8NEP7 349 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 TOX2Q96NM4 488 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 STRBPQ96SI9 672 aaKnown RBP10.36□□□□□ -0.75
CLPX-205ENST00000559218 TSEN34Q9BSV6 310 aaKnown RBP10.36□□□□□ -0.75
CLPX-205ENST00000559218 STARD7Q9NQZ5 370 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 ZHX1Q9UKY1 873 aaPredicted RBP10.36□□□□□ -0.75
CLPX-205ENST00000559218 DDX19BQ9UMR2 479 aa10.36□□□□□ -0.75
CLPX-205ENST00000559218 SYNGAP1Q96PV0 1343 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
CLPX-205ENST00000559218 DCDC2CA8MYV0 355 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 MINDY4BA8MYZ0 360 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 MS4A1P11836 297 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 SBK1Q52WX2 424 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 TSHZ3Q63HK5 1081 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 MAMDC4Q6UXC1 1216 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 C16orf59Q7L2K0 433 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 CPXCR1Q8N123 301 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 MSL3Q8N5Y2 521 aaKnown RBP10.35□□□□□ -0.75
CLPX-205ENST00000559218 DDX11Q96FC9 970 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 FGD4Q96M96 766 aa10.35□□□□□ -0.75
CLPX-205ENST00000559218 RAVER2Q9HCJ3 691 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms