RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 A0A087X0B3 334 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 F8W031 263 aaPredicted RBP12.8□□□□□ -0.36
CLPX-204ENST00000559152 KIF2AO00139 706 aaPredicted RBP12.8□□□□□ -0.36
CLPX-204ENST00000559152 CCP110O43303 1012 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 TTLL1O95922 423 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 MYL1P05976 194 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 GTF2F1P35269 517 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLPX-204ENST00000559152 AFMP43652 599 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 HDLBPQ00341 1268 aaKnown RBP12.8□□□□□ -0.36
CLPX-204ENST00000559152 E2F4Q16254 413 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 TYW1BQ6NUM6 668 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 GRAMD1CQ8IYS0 662 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
CLPX-204ENST00000559152 SRCAPQ6ZRS2 3230 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 SMCO2A6NFE2 343 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 GTPBP6O43824 516 aaPredicted RBP12.79□□□□□ -0.36
CLPX-204ENST00000559152 TUBB4AP04350 444 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 ZNF18P17022 549 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 NONOQ15233 471 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLPX-204ENST00000559152 USP17L2Q6R6M4 530 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 VSTM4Q8IW00 320 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.369e-11■■□□□ 14.2
CLPX-204ENST00000559152 CCDC17Q96LX7 622 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 AK8Q96MA6 479 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 EHD4Q9H223 541 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 CDK5RAP2Q96SN8 1893 aa12.79□□□□□ -0.36
CLPX-204ENST00000559152 IGKV6D-41A0A0C4DH26 115 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 PDHBP11177 359 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 ARID5BQ14865 1188 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 SLC35G1Q2M3R5 365 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 SPATA1Q5VX52 437 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 ZDHHC15Q96MV8 337 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 DHX36Q9H2U1 1008 aaKnown RBP12.78□□□□□ -0.36
CLPX-204ENST00000559152 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
CLPX-204ENST00000559152 MYH1P12882 1939 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 TNNT1P13805 278 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 IL17AQ16552 155 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 INF2Q27J81 1249 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 CDC42EP5Q6NZY7 148 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 PDXDC2PQ6P474 469 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 CCSER1Q9C0I3 900 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 MAGEF1Q9HAY2 307 aa12.78□□□□□ -0.36
CLPX-204ENST00000559152 PSDA5PKW4 1024 aaPredicted RBP12.77□□□□□ -0.36
CLPX-204ENST00000559152 USP17L5A8MUK1 530 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 UBA7P41226 1012 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 STAT6P42226 847 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 CRKP46108 304 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.362e-10■□□□□ 8.9
CLPX-204ENST00000559152 PTPN14Q15678 1187 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.36
CLPX-204ENST00000559152 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 ARMCX5Q6P1M9 558 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.36
CLPX-204ENST00000559152 HOMER1Q86YM7 354 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.36
CLPX-204ENST00000559152 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.36
CLPX-204ENST00000559152 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
CLPX-204ENST00000559152 AKR1B1P15121 316 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 GPATCH4Q5T3I0 446 aaKnown RBP12.77□□□□□ -0.37
CLPX-204ENST00000559152 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 NEK8Q86SG6 692 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 CCAR2Q8N163 923 aaKnown RBP12.77□□□□□ -0.37
CLPX-204ENST00000559152 REXO1Q8N1G1 1221 aaKnown RBP12.77□□□□□ -0.37
CLPX-204ENST00000559152 RASSF8Q8NHQ8 419 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 PIGSQ96S52 555 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.37
CLPX-204ENST00000559152 DDX4Q9NQI0 724 aaKnown RBP12.77□□□□□ -0.37
CLPX-204ENST00000559152 DISC1Q9NRI5 854 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 SYNRGQ9UMZ2 1314 aa12.77□□□□□ -0.37
CLPX-204ENST00000559152 SCNN1DP51172 638 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
CLPX-204ENST00000559152 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 MAP7D2Q96T17 732 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 CUL4BQ13620 913 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 FILIP1LQ4L180 1135 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
CLPX-204ENST00000559152 CEP135Q66GS9 1140 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 DEFB132Q7Z7B7 95 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 SUPT20HQ8NEM7 779 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 DPF2Q92785 391 aa12.76□□□□□ -0.37
CLPX-204ENST00000559152 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
CLPX-204ENST00000559152 SHMT1P34896 483 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms