RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 FEM1BQ9UK73 627 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 GJD2Q9UKL4 321 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 PRR12Q9ULL5 1215 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 RIPK3Q9Y572 518 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 ZNFX1Q9P2E3 1918 aaKnown RBP13.42□□□□□ -0.26
SNX1-204ENST00000559061 PALM3A6NDB9 673 aaPredicted RBP13.41□□□□□ -0.26
SNX1-204ENST00000559061 PRKCZQ05513 592 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 GRM4Q14833 912 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 WTAPQ15007 396 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 CCDC96Q2M329 555 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 CCDC178Q5BJE1 867 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
SNX1-204ENST00000559061 DHX32Q7L7V1 743 aaKnown RBP13.41□□□□□ -0.26
SNX1-204ENST00000559061 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 GTF3C2Q8WUA4 911 aaPredicted RBP13.41□□□□□ -0.26
SNX1-204ENST00000559061 USP6NLQ92738 828 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 KIFC2Q96AC6 838 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 SPATC1LQ9H0A9 340 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 KAT14Q9H8E8 782 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 HOXC10Q9NYD6 342 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 MAD2L2Q9UI95 211 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 BRPF3Q9ULD4 1205 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
SNX1-204ENST00000559061 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
SNX1-204ENST00000559061 PLXNA1Q9UIW2 1896 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 BAZ2BQ9UIF8 2168 aaKnown RBP13.4□□□□□ -0.26
SNX1-204ENST00000559061 CYTH3O43739 400 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 RPS6KB1P23443 525 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 LIFRP42702 1097 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 STAT2P52630 851 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 RAB11FIP4Q86YS3 637 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
SNX1-204ENST00000559061 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 KIF2CQ99661 725 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 UBA5Q9GZZ9 404 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
SNX1-204ENST00000559061 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 PTCH2Q9Y6C5 1203 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 MYH6P13533 1939 aa13.4□□□□□ -0.26
SNX1-204ENST00000559061 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 IGHA2P01877 340 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
SNX1-204ENST00000559061 ERCC3P19447 782 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 RXRAP19793 462 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 FCGRTP55899 365 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 TOB2Q14106 344 aaPredicted RBP13.39□□□□□ -0.27
SNX1-204ENST00000559061 KRT32Q14532 448 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 MORN1Q5T089 497 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 GPR142Q7Z601 462 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 FAM160B2Q86V87 743 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 RIOX2Q8IUF8 465 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
SNX1-204ENST00000559061 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
SNX1-204ENST00000559061 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
SNX1-204ENST00000559061 CASTP20810 708 aaKnown RBP13.38□□□□□ -0.27
SNX1-204ENST00000559061 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 MTMR8Q96EF0 704 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 UPF3BQ9BZI7 483 aaKnown RBP13.38□□□□□ -0.27
SNX1-204ENST00000559061 TM6SF1Q9BZW5 370 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
SNX1-204ENST00000559061 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 LRRC37A2A6NM11 1700 aa13.38□□□□□ -0.27
SNX1-204ENST00000559061 NID2Q14112 1375 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 TNPO2O14787 897 aaKnown RBP13.37□□□□□ -0.27
SNX1-204ENST00000559061 DDAH1O94760 285 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 FMNL1O95466 1100 aaPredicted RBP13.37□□□□□ -0.27
SNX1-204ENST00000559061 PARP1P09874 1014 aaKnown RBP13.37□□□□□ -0.27
SNX1-204ENST00000559061 FLT3LGP49771 235 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 GRB14Q14449 540 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
SNX1-204ENST00000559061 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 BLOC1S2Q6QNY1 142 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 Q6ZUG5 572 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 RUFY3Q7L099 469 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX1-204ENST00000559061 ADGRF4Q8IZF3 695 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 CHURC1Q8WUH1 139 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 FGD4Q96M96 766 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 JMJD4Q9H9V9 463 aa13.37□□□□□ -0.27
SNX1-204ENST00000559061 COBLO75128 1261 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 PTPREP23469 700 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 MAPK4P31152 587 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 STAT3P40763 770 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 OAZ1P54368 228 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 EVCP57679 992 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 APOBRQ0VD83 1088 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 FUT2Q10981 343 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 PLS1Q14651 629 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms