RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 PLEKHA8P1O95397 391 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 LARGE1O95461 756 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 CDC27P30260 824 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 HOXA7P31268 230 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SLC16A2P36021 539 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 MAP2K2P36507 400 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 AKAP17AQ02040 695 aaKnown RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SCRN1Q12765 414 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 COG2Q14746 738 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 TAF1CQ15572 869 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 GPAT2Q6NUI2 795 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 IFNL1Q8IU54 200 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 CCDC83Q8IWF9 413 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 FAM43AQ8N2R8 423 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 CCDC82Q8N4S0 544 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 NECAB1Q8N987 351 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 PRPF38AQ8NAV1 312 aaKnown RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SMCR8Q8TEV9 937 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 GTF3C2Q8WUA4 911 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SNX21Q969T3 373 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 TMX3Q96JJ7 454 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 ZIC5Q96T25 663 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 UBA5Q9GZZ9 404 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 ASCC2Q9H1I8 757 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 VAT1LQ9HCJ6 419 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 ZCCHC17Q9NP64 241 aaKnown RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 FBXO28Q9NVF7 368 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 HOXC10Q9NYD6 342 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SEC63Q9UGP8 760 aaKnown RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 PPP1R9AQ9ULJ8 1098 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SLC45A1Q9Y2W3 748 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 MYPNQ86TC9 1320 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 SPDYE16A6NNV3 312 aaPredicted RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 LOC285556D6RIA3 1793 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 IGF2BP3O00425 579 aaKnown RBP eCLIP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 HSP90AA1P07900 732 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 FDX1P10109 184 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 CYP2C8P10632 490 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 SMARCA1P28370 1054 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 DSG3P32926 999 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 TM4SF4P48230 202 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 HERVK_113P62684 666 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 BTNL9Q6UXG8 535 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 HOMER1Q86YM7 354 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 TRIM22Q8IYM9 498 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 ADGRF4Q8IZF3 695 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 CMTR1Q8N1G2 835 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 SRBD1Q8N5C6 995 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 PIBF1Q8WXW3 757 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 ATG4CQ96DT6 458 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 RRP36Q96EU6 259 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 P2RX7Q99572 595 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 PTPN18Q99952 460 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 PAGR1Q9BTK6 254 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 SPZ1Q9BXG8 430 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 CPVLQ9H3G5 476 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 ZFYVE28Q9HCC9 887 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 RBM27Q9P2N5 1060 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 PRR12Q9ULL5 1215 aa7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
CHRNA3-204ENST00000559002 CNTNAP5Q8WYK1 1306 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 ZBTB5O15062 677 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 DTNBO60941 627 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 IFNAR1P17181 557 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 GCLCP48506 637 aaPredicted RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 SSRP1Q08945 709 aaKnown RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 PLS1Q14651 629 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 CDC37Q16543 378 aaPredicted RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 CCDC174Q6PII3 467 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 NBPF11Q86T75 865 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 MB21D1Q8N884 522 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 PHKBQ93100 1093 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 PIGSQ96S52 555 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 LLPHQ9BRT6 129 aaKnown RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 BEGAINQ9BUH8 593 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 SLC26A6Q9BXS9 759 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 RNF26Q9BY78 433 aaPredicted RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 RIOX1Q9H6W3 641 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 JMJD4Q9H9V9 463 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 FAM217BQ9NTX9 383 aaPredicted RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 DAXXQ9UER7 740 aaPredicted RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 CEP350Q5VT06 3117 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 PTPRFP10586 1907 aa7.64□□□□□ -1.19
CHRNA3-204ENST00000559002 STK36Q9NRP7 1315 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 PNMA6FA0A0J9YX94 578 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 hCG_1642624A0A1W2PR95 340 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 PTPDC1A2A3K4 754 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 VWA5AO00534 786 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 CA12O43570 354 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 CYTH3O43739 400 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 DEXIO95424 95 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 FMNL1O95466 1100 aaPredicted RBP7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 SLC4A3P48751 1232 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 SNAP25P60880 206 aa7.63□□□□□ -1.19
CHRNA3-204ENST00000559002 HMGN5P82970 282 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms