RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 IGF2BP3O00425 579 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEO1-205ENST00000558886 ZBED4O75132 1171 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 TRPA1O75762 1119 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 RXRAP19793 462 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 MCM2P49736 904 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 TROAPQ12815 778 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 STK3Q13188 491 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 RTN1Q16799 776 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 CPLX2Q6PUV4 134 aaKnown RBP12.16□□□□□ -0.46
NEO1-205ENST00000558886 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
NEO1-205ENST00000558886 ZNF274Q96GC6 653 aaPredicted RBP12.16□□□□□ -0.46
NEO1-205ENST00000558886 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
NEO1-205ENST00000558886 P2RX7Q99572 595 aaKnown RBP12.16□□□□□ -0.46
NEO1-205ENST00000558886 VAT1LQ9HCJ6 419 aa12.16□□□□□ -0.46
NEO1-205ENST00000558886 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
NEO1-205ENST00000558886 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
NEO1-205ENST00000558886 CPLX1O14810 134 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 CYP2C8P10632 490 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 PDIA3P30101 505 aaKnown RBP12.15□□□□□ -0.46
NEO1-205ENST00000558886 DSG3P32926 999 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 SLC16A2P36021 539 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 RCAN1P53805 252 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
NEO1-205ENST00000558886 SYDE2Q5VT97 1194 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 TTBK2Q6IQ55 1244 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
NEO1-205ENST00000558886 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 PPP1R9AQ9ULJ8 1098 aa12.15□□□□□ -0.46
NEO1-205ENST00000558886 PLA2G6O60733 806 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 FDX1P10109 184 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
NEO1-205ENST00000558886 SLC4A3P48751 1232 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 EVCP57679 992 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 HERVK_113P62684 666 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 AKAP17AQ02040 695 aaKnown RBP12.14□□□□□ -0.47
NEO1-205ENST00000558886 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
NEO1-205ENST00000558886 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 PAGR1Q9BTK6 254 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 TPCN1Q9ULQ1 816 aa12.14□□□□□ -0.47
NEO1-205ENST00000558886 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 PFKFB2O60825 505 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 PLS1Q14651 629 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 MB21D1Q8N884 522 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 PIBF1Q8WXW3 757 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 ATG4CQ96DT6 458 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
NEO1-205ENST00000558886 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
NEO1-205ENST00000558886 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 PRR12Q9ULL5 1215 aa12.13□□□□□ -0.47
NEO1-205ENST00000558886 PTPRFP10586 1907 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
NEO1-205ENST00000558886 VWA5AO00534 786 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 CDKL5O76039 1030 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 TBC1D8O95759 1140 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 SMARCA1P28370 1054 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
NEO1-205ENST00000558886 CRHR2Q13324 411 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 TMTC3Q6ZXV5 915 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 CPXCR1Q8N123 301 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 GPRC5AQ8NFJ5 357 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 RRP36Q96EU6 259 aaKnown RBP12.12□□□□□ -0.47
NEO1-205ENST00000558886 ABHD8Q96I13 439 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 CPVLQ9H3G5 476 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
NEO1-205ENST00000558886 SEC63Q9UGP8 760 aaKnown RBP12.12□□□□□ -0.47
NEO1-205ENST00000558886 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 RABGAP1Q9Y3P9 1069 aa12.12□□□□□ -0.47
NEO1-205ENST00000558886 TLR2O60603 784 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 PLEKHA8P1O95397 391 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 CDC27P30260 824 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 SNAP25P60880 206 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 CCNA1P78396 465 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
NEO1-205ENST00000558886 TRAF1Q13077 416 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 ME3Q16798 604 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 HOMER1Q86YM7 354 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
NEO1-205ENST00000558886 SRBD1Q8N5C6 995 aaKnown RBP12.11□□□□□ -0.47
NEO1-205ENST00000558886 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
NEO1-205ENST00000558886 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
NEO1-205ENST00000558886 STAT3P40763 770 aa12.1□□□□□ -0.47
NEO1-205ENST00000558886 SCRN1Q12765 414 aa12.1□□□□□ -0.47
NEO1-205ENST00000558886 KIF22Q14807 665 aa12.1□□□□□ -0.47
NEO1-205ENST00000558886 CDC37Q16543 378 aaPredicted RBP12.1□□□□□ -0.47
NEO1-205ENST00000558886 WDR78Q5VTH9 848 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms