RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ADCY6O43306 1168 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 RTP1P59025 263 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 TFAP4Q01664 338 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
VPS18-203ENST00000558855 LRRC41Q15345 812 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 ZNF444Q8N0Y2 327 aaPredicted RBP16.15■□□□□ 0.18
VPS18-203ENST00000558855 CPXCR1Q8N123 301 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 KIFC2Q96AC6 838 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 NAPBQ9H115 298 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 RAVER2Q9HCJ3 691 aaKnown RBP16.15■□□□□ 0.18
VPS18-203ENST00000558855 IL17RBQ9NRM6 502 aa16.15■□□□□ 0.18
VPS18-203ENST00000558855 DNAJC25-GNG10A0A024R161 153 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 MSCO60682 206 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 IGHDP01880 384 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
VPS18-203ENST00000558855 SLC4A3P48751 1232 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 SNAP25P60880 206 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 ZNF589Q86UQ0 364 aaPredicted RBP16.14■□□□□ 0.17
VPS18-203ENST00000558855 GMCL1P1Q8NEA9 526 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 FERMT2Q96AC1 680 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 TINF2Q9BSI4 451 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 TEX13BQ9BXU2 312 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 LNPKQ9C0E8 428 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
VPS18-203ENST00000558855 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
VPS18-203ENST00000558855 TTLL1O95922 423 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 PGK1P00558 417 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
VPS18-203ENST00000558855 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 ADCYAP1R1P41586 468 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 KCTD2Q14681 263 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 SLFN13Q68D06 897 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 Q7L0L9 218 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 ZNF536O15090 1300 aa16.13■□□□□ 0.17
VPS18-203ENST00000558855 SNAI1O95863 264 aaPredicted RBP16.12■□□□□ 0.17
VPS18-203ENST00000558855 NMIQ13287 307 aaPredicted RBP16.12■□□□□ 0.17
VPS18-203ENST00000558855 TRIM60Q495X7 471 aa16.12■□□□□ 0.17
VPS18-203ENST00000558855 SLC39A5Q6ZMH5 540 aa16.12■□□□□ 0.17
VPS18-203ENST00000558855 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
VPS18-203ENST00000558855 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
VPS18-203ENST00000558855 EXOC6Q8TAG9 804 aa16.12■□□□□ 0.17
VPS18-203ENST00000558855 ATP11BQ9Y2G3 1177 aa16.12■□□□□ 0.17
VPS18-203ENST00000558855 ASTN1O14525 1302 aa16.12■□□□□ 0.17
VPS18-203ENST00000558855 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 TMEM232C9JQI7 657 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 ATP2A1O14983 1001 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 PTGS1P23219 599 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 SNX17Q15036 470 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 SMC5Q8IY18 1101 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 TDHQ8IZJ6 230 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 NACAP1Q9BZK3 213 aa16.11■□□□□ 0.17
VPS18-203ENST00000558855 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
VPS18-203ENST00000558855 ADAMTS4O75173 837 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 BMP3P12645 472 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 MCCP23508 829 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 NOVP48745 357 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 CNTN2Q02246 1040 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 PDE4BQ07343 736 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 KCTD1Q719H9 257 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
VPS18-203ENST00000558855 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 KATNBL1Q9H079 304 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 XPNPEP3Q9NQH7 507 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 PDLIM7Q9NR12 457 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 HOMER2Q9NSB8 354 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 FEM1BQ9UK73 627 aa16.1■□□□□ 0.17
VPS18-203ENST00000558855 DIS3Q9Y2L1 958 aaKnown RBP16.1■□□□□ 0.17
VPS18-203ENST00000558855 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 FGRP09769 529 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 ITGB8P26012 769 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
VPS18-203ENST00000558855 ARRDC4Q8NCT1 418 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
VPS18-203ENST00000558855 GMCL1Q96IK5 515 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 SYNPO2Q9UMS6 1093 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
VPS18-203ENST00000558855 TSPY2A6NKD2 308 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 ZBED4O75132 1171 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 FGAP02671 866 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 HSPD1P10809 573 aaKnown RBP16.08■□□□□ 0.16
VPS18-203ENST00000558855 COPB2P35606 906 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 HAND2P61296 217 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 ALX1Q15699 326 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 MAMDC4Q6UXC1 1216 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 PLEKHM2Q8IWE5 1019 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 PURBQ96QR8 312 aaKnown RBP16.08■□□□□ 0.16
VPS18-203ENST00000558855 ZNF287Q9HBT7 754 aa16.08■□□□□ 0.16
VPS18-203ENST00000558855 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms