RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 RNF113AO15541 343 aaKnown RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 GPAA1O43292 621 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 ZBED4O75132 1171 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 CLTBP09497 229 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 TAL1P17542 331 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 C9orf50Q5SZB4 431 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 MAMDC4Q6UXC1 1216 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 SH3RF1Q7Z6J0 888 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 ZNF444Q8N0Y2 327 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 TRIM43Q96BQ3 446 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 TSEN34Q9BSV6 310 aaKnown RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 CTDP1Q9Y5B0 961 aaPredicted RBP12.78□□□□□ -0.36
AP3S2-206ENST00000558806 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
AP3S2-206ENST00000558806 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 IGKV6D-41A0A0C4DH26 115 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 ADAMTS4O75173 837 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 APPP05067 770 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 SMAD3P84022 425 aaKnown RBP12.77□□□□□ -0.37
AP3S2-206ENST00000558806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
AP3S2-206ENST00000558806 MKL1Q969V6 931 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 DCTPP1Q9H773 170 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.37
AP3S2-206ENST00000558806 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 FEM1BQ9UK73 627 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
AP3S2-206ENST00000558806 PATL2C9JE40 543 aaKnown RBP12.76□□□□□ -0.37
AP3S2-206ENST00000558806 KIAA0355O15063 1070 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
AP3S2-206ENST00000558806 TTLL1O95922 423 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 RAG1P15918 1043 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 ACLYP53396 1101 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 OAZ1P54368 228 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.76□□□□□ -0.37
AP3S2-206ENST00000558806 CPXCR1Q8N123 301 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 ANKRD35Q8N283 1001 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 CEP95Q96GE4 821 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 TOX2Q96NM4 488 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 NACAP1Q9BZK3 213 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 STARD7Q9NQZ5 370 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 ZHX1Q9UKY1 873 aaPredicted RBP12.76□□□□□ -0.37
AP3S2-206ENST00000558806 SYNRGQ9UMZ2 1314 aa12.76□□□□□ -0.37
AP3S2-206ENST00000558806 LAMA2P24043 3122 aaKnown RBP12.76□□□□□ -0.37
AP3S2-206ENST00000558806 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 ERC2O15083 957 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 DUSP11O75319 330 aaKnown RBP12.75□□□□□ -0.37
AP3S2-206ENST00000558806 PRDM1O75626 825 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 SNAI1O95863 264 aaPredicted RBP12.75□□□□□ -0.37
AP3S2-206ENST00000558806 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
AP3S2-206ENST00000558806 FDX1P10109 184 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 ITGB8P26012 769 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 PDE4BQ07343 736 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 UNC80Q8N2C7 3258 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 KLHDC9Q8NEP7 349 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 CHST13Q8NET6 341 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 LENG1Q96BZ8 264 aaPredicted RBP12.75□□□□□ -0.37
AP3S2-206ENST00000558806 PLIN4Q96Q06 1357 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 CDX2Q99626 313 aaPredicted RBP12.75□□□□□ -0.37
AP3S2-206ENST00000558806 SEMA6BQ9H3T3 888 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 ABHD16BQ9H3Z7 469 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 SPC25Q9HBM1 224 aa12.75□□□□□ -0.37
AP3S2-206ENST00000558806 RAVER2Q9HCJ3 691 aaKnown RBP12.75□□□□□ -0.37
AP3S2-206ENST00000558806 SMCHD1A6NHR9 2005 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 ELP1O95163 1332 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 MROH7Q68CQ1 1323 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 TMEM265A0A087WTH1 108 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 M0R2C6 588 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 BMP3P12645 472 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 CST5P28325 142 aaPredicted RBP12.74□□□□□ -0.37
AP3S2-206ENST00000558806 FPGSQ05932 587 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 ACVR2BQ13705 512 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 KCNA10Q16322 511 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 PPP4R3BQ5MIZ7 849 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 CCSAPQ6IQ19 270 aaPredicted RBP12.74□□□□□ -0.37
AP3S2-206ENST00000558806 LRRC47Q8N1G4 583 aaKnown RBP12.74□□□□□ -0.37
AP3S2-206ENST00000558806 PCSK9Q8NBP7 692 aaKnown RBP12.74□□□□□ -0.37
AP3S2-206ENST00000558806 NEDD1Q8NHV4 660 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 RNPC3Q96LT9 517 aaKnown RBP12.74□□□□□ -0.37
AP3S2-206ENST00000558806 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
AP3S2-206ENST00000558806 MYH4Q9Y623 1939 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms