RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	BPIFA3	Q9BQP9	254 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	FGFR1OP2	Q9NVK5	253 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	ZNF446	Q9NWS9	450 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	MAP3K5	Q99683	1374 aa		10.61	□□□□□ -0.71
TRPM1-208	ENST00000558768	CFAP73	A6NFT4	308 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	GIPC1	O14908	333 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	PRR29	P0C7W0	189 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	PPP4R3A	Q6IN85	833 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	PCDHA7	Q9UN72	937 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	RNF17	Q9BXT8	1623 aa	Known RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	PDHA1	P08559	390 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	CORO7	P57737	925 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	ANO1	Q5XXA6	986 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	BICDL1	Q6ZP65	573 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	NCOA7	Q8NI08	942 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	MAIP1	Q8WWC4	291 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	RAPGEF4	Q8WZA2	1011 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCDC124	Q96CT7	223 aa	Known RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	DYDC2	Q96IM9	177 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	USP44	Q9H0E7	712 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	DIABLO	Q9NR28	239 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	GIMAP4	Q9NUV9	329 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	MYO1A	Q9UBC5	1043 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	STXBP3	O00186	592 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	ALDH1L1	O75891	902 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCT6A	P40227	531 aa	Known RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	TRPC1	P48995	793 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	NECTIN1	Q15223	517 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	C6orf118	Q5T5N4	469 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	ARMCX5	Q6P1M9	558 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	MICU3	Q86XE3	530 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	SLC26A6	Q9BXS9	759 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	KCND1	Q9NSA2	647 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	TBC1D23	Q9NUY8	699 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	AMOTL2	Q9Y2J4	779 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	NFE2L3	Q9Y4A8	694 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	ATP10D	Q9P241	1426 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	TPD52L2	O43399	206 aa	Known RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	PSEN1	P49768	467 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	DHX40	Q8IX18	779 aa	Known RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	VPS16	Q9H269	839 aa		10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	DBNL	Q9UJU6	430 aa	Known RBP	10.6	□□□□□ -0.71
TRPM1-208	ENST00000558768	WASL	O00401	505 aa	Predicted RBP	10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	IFNAR2	P48551	515 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCDC105	Q8IYK2	499 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	CCDC89	Q8N998	374 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	RMI1	Q9H9A7	625 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	ABCB6	Q9NP58	842 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	SLC4A7	Q9Y6M7	1214 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	HARS	P12081	509 aa	Known RBP	10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	NR1D1	P20393	614 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	GJC1	P36383	396 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	KLC1	Q07866	573 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	DRP2	Q13474	957 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	NBPF14	Q5TI25	921 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	VSTM4	Q8IW00	320 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	MSANTD4	Q8NCY6	345 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	PLEKHA4	Q9H4M7	779 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	RTEL1	Q9NZ71	1219 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	KLF18	A0A0U1RQI7	1052 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	WDR46	O15213	610 aa	Known RBP	10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	PMS1	P54277	932 aa	Known RBP	10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	LAMB3	Q13751	1172 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	RAPGEF1	Q13905	1077 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	INA	Q16352	499 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	GRAMD1B	Q3KR37	738 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	TMEM67	Q5HYA8	995 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	WAPL	Q7Z5K2	1190 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	PI4K2B	Q8TCG2	481 aa		10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	G3BP2	Q9UN86	482 aa	Known RBP	10.59	□□□□□ -0.71
TRPM1-208	ENST00000558768	IFIT1	P09914	478 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	EEF1B2	P24534	225 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	NDUFA8	P51970	172 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	ADK	P55263	362 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	MRPS35	P82673	323 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	MRPS9	P82933	396 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	IDI1	Q13907	227 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CCDC84	Q86UT8	332 aa	Predicted RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CCDC13	Q8IYE1	715 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CASP10	Q92851	521 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	MRRF	Q96E11	262 aa	Known RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CEP19	Q96LK0	163 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DESI2	Q9BSY9	194 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	LRP2BP	Q9P2M1	347 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DBF4	Q9UBU7	674 aa	Predicted RBP	10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768		A0A087WWV3	80 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768		A0A1B0GW55	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	PFKFB2	O60825	505 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4L2	P0CJ85	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4L3	P0CJ86	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4L4	P0CJ87	422 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4L5	P0CJ88	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4L6	P0CJ89	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	DUX4L7	P0CJ90	424 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	CMA1	P23946	247 aa		10.58	□□□□□ -0.72
TRPM1-208	ENST00000558768	PEX26	Q7Z412	305 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms